Mycobacterium phage JayJay
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Detailed Information for Phage JayJay
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByDale Liebenberg
Year Found2022
Location FoundJohannesburg, South Africa
Finding InstitutionUniversity of the Witwatersrand
ProgramUnavailable
From enriched soil sample?No
Isolation Temperature37°C
GPS Coordinates26.13832 S, 27.952651 E Map
Discovery NotesThe sample was taken from a freshly prepared flower bed in Berario, Johannesburg.
Naming NotesThe name of pet dogs
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 21, 2023
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage578
Genome length (bp)154239
Character of genome endsCircularly Permuted
GC Content64.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ablatia (C1)

Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Asterius (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

Babyland (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Belieber (C1)

BigCity (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Blackdragon (C1)

Blubba (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Capablanca (C1)

Caravan (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Chomp (C1)

CindyLou (C1)

Colt (C1)

Concombre (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

DeejaClivia (C1)

Delilah (C1)

Delylah (C1)

Demodog (C1)

Derek (C1)

Dietrick (C1)

DirtMonster (C1)

Domi (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EggyFarm (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

Fongie (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Gamgam (C1)

Ghost (C1)

Gizmo (C1)

GlutenPhree (C1)

Grasshills (C1)

Grungle (C1)

Guwapp (C1)

Halldule (C1)

HyRo (C1)

I3 (C1)

IkeLoa (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Issimir (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

JayJay (C1)

Jedediah (C1)

Jemmno (C1)

Jessibeth14 (C1)

Jezreel (C1)

JigglyPuff (C1)

JPickles (C1)

JulietS (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

Lee7 (C1)

Lethe (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LordLeafolot (C1)

LRRHood (C1)

Lukilu (C1)

Maby2021 (C1)

Mangeria (C1)

Matsumoto (C1)

McGee (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Mikro (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Naval22 (C1)

NedWong (C1)

Ngannou (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

Primadonna (C1)

PurduePete (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Spec (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

SrishMeg2525 (C1)

StephanieG (C1)

Stubby (C1)

StubbySaigey (C1)

SVoro (C1)

Tainan (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yassified (C1)

YemiJoy2021 (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Greely (C2)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionUniversity of the Witwatersrand
Annotation StatusIn GenBank
MorphotypeMyoviridae
Number of Genes234
Number of tRNAs32
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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JayJay_1

JayJay_2

JayJay_3
(nucleotidyltransferase)

JayJay_4

JayJay_5

JayJay_6

JayJay_7

JayJay_8

JayJay_9

JayJay_10

JayJay_11

JayJay_12

JayJay_13

JayJay_14

JayJay_15

JayJay_16

JayJay_17

JayJay_18

JayJay_19

JayJay_20

JayJay_21
(histidine triad nucleotide binding protein)

JayJay_22

JayJay_23

JayJay_24

JayJay_25

JayJay_26

JayJay_27

JayJay_28

JayJay_29

JayJay_30

JayJay_31

JayJay_32
(band-7-like membrane protein)

JayJay_33

JayJay_34

JayJay_35

JayJay_36

JayJay_37

JayJay_38
(ribbon-helix-helix DNA binding protein)

JayJay_39

JayJay_40

JayJay_41

JayJay_42

JayJay_43

JayJay_44

JayJay_45

JayJay_46

JayJay_47

JayJay_48

JayJay_49

JayJay_50

JayJay_51

JayJay_52

JayJay_53

JayJay_54

JayJay_55

JayJay_56

JayJay_57

JayJay_58

JayJay_59

JayJay_60

JayJay_61
(helix-turn-helix DNA binding domain protein)

JayJay_62
(helix-turn-helix DNA binding protein)

JayJay_63

JayJay_64

JayJay_65

JayJay_66

JayJay_67

JayJay_68

JayJay_69

JayJay_70

JayJay_71

JayJay_72

JayJay_73

JayJay_74

JayJay_75

JayJay_76

JayJay_77

JayJay_78

JayJay_79

JayJay_80

JayJay_81

JayJay_82

JayJay_83

JayJay_84

JayJay_85

JayJay_86

JayJay_87

JayJay_88

JayJay_89

JayJay_90 — tRNA
(tRNA-Ser(gct))

JayJay_91 — tRNA
(tRNA-Leu(cag))

JayJay_92 — tRNA
(tRNA-Leu(gag))

JayJay_93 — tRNA
(tRNA-Leu(caa))

JayJay_94

JayJay_95

JayJay_96
(intein-containing portal protein)

JayJay_97

JayJay_98

JayJay_99
(ThyX-like thymidylate synthase)

JayJay_100

JayJay_101
(RNA ligase)

JayJay_102

JayJay_103

JayJay_104

JayJay_105
(major capsid protein)

JayJay_106
(Holliday junction resolvase)

JayJay_107

JayJay_108
(head fiber protein)

JayJay_109

JayJay_110

JayJay_111

JayJay_112

JayJay_113

JayJay_114

JayJay_115

JayJay_116

JayJay_117

JayJay_118

JayJay_119

JayJay_120

JayJay_121

JayJay_122

JayJay_123

JayJay_124

JayJay_125

JayJay_126
(acetyltransferase)

JayJay_127

JayJay_128

JayJay_129

JayJay_130

JayJay_131

JayJay_132
(tail sheath protein)

JayJay_133

JayJay_134

JayJay_135
(tail assembly chaperone)

JayJay_136
(tail assembly chaperone)

JayJay_137
(tape measure protein)

JayJay_138

JayJay_139

JayJay_140

JayJay_141
(minor tail protein)

JayJay_142
(minor tail protein)

JayJay_143
(minor tail protein)

JayJay_144
(baseplate wedge protein)

JayJay_145
(baseplate J protein)

JayJay_146

JayJay_147

JayJay_148

JayJay_149
(minor tail protein)

JayJay_150
(minor tail protein)

JayJay_151

JayJay_152

JayJay_153

JayJay_154

JayJay_155

JayJay_156

JayJay_157

JayJay_158 — tRNA
(tRNA-Pro(tgg))

JayJay_159 — tRNA
(tRNA-Trp(cca))

JayJay_160

JayJay_161
(peptidyl tRNA hydrolase)

JayJay_162 — tRNA
(tRNA-Pyl(cta))

JayJay_163 — tRNA
(tRNA-Met(cat))

JayJay_164 — tRNA
(tRNA-Cys(gca))

JayJay_165 — tRNA
(tRNA-Glu(ctc))

JayJay_166 — tRNA
(tRNA-His(gtg))

JayJay_167 — tRNA
(tRNA-Ala(tgc))

JayJay_168 — tRNA
(tRNA-Phe(gaa))

JayJay_169 — tRNA
(tRNA-Val(cac))

JayJay_170 — tRNA
(tRNA-Lys(ctt))

JayJay_171 — tRNA
(tRNA-Glu(ttc))

JayJay_172 — tRNA
(tRNA-Gly(tcc))

JayJay_173 — tRNA
(tRNA-Thr(cgt))

JayJay_174 — tRNA
(tRNA-Thr(tgt))

JayJay_175 — tRNA
(tRNA-Thr(ggt))

JayJay_176
(minor tail protein)

JayJay_177

JayJay_178 — tRNA
(tRNA-Gly(gcc))

JayJay_179 — tRNA
(tRNA-Asp(gtc))

JayJay_180 — tRNA
(tRNA-Ile2(cat))

JayJay_181 — tRNA
(tRNA-Ile(gat))

JayJay_182 — tRNA
(tRNA-Arg(acg))

JayJay_183 — tRNA
(tRNA-Val(gac))

JayJay_184 — tRNA
(tRNA-Arg(ccg))

JayJay_185 — tRNA
(tRNA-Arg(cct))

JayJay_186 — tmRNA
(Tag peptide: ATDTDATVTDAEIEAFFAEEAAALV*)

JayJay_187 — tRNA
(tRNA-Gln(ttg))

JayJay_188 — tRNA
(tRNA-Arg(tct))

JayJay_189

JayJay_190
(DNA helicase)

JayJay_191

JayJay_192

JayJay_193

JayJay_194

JayJay_195

JayJay_196

JayJay_197

JayJay_198

JayJay_199

JayJay_200
(thymidylate kinase)

JayJay_201
(aminotransferase)

JayJay_202

JayJay_203

JayJay_204
(DnaC-like helicase loader)

JayJay_205
(DnaB-like dsDNA helicase)

JayJay_206

JayJay_207
(DNA primase)

JayJay_208

JayJay_209
(DnaJ-like chaperonin)

JayJay_210
(ssDNA binding protein)

JayJay_211
(DnaE-like DNA polymerase III)

JayJay_212
(RF-1 peptide chain release factor)

JayJay_213
(RecA-like DNA recombinase)

JayJay_214
(Holliday junction resolvase)

JayJay_215

JayJay_216
(exonuclease)

JayJay_217
(RusA-like resolvase)

JayJay_218

JayJay_219

JayJay_220

JayJay_221

JayJay_222

JayJay_223

JayJay_224

JayJay_225

JayJay_226 — tRNA
(tRNA-Gln(ctg))

JayJay_227 — tRNA
(tRNA-Asn(gtt))

JayJay_228

JayJay_229

JayJay_230

JayJay_231

JayJay_232

JayJay_233

JayJay_234

JayJay_235
(Ro-like RNA binding protein)

JayJay_236

JayJay_237

JayJay_238

JayJay_239

JayJay_240

JayJay_241
(glycosyltransferase)

JayJay_242
(glycosyltransferase)

JayJay_243
(glycosyltransferase)

JayJay_244
(PnuC-like nicotinamide riboside transporter)

JayJay_245
(glycosyltransferase)

JayJay_246

JayJay_247

JayJay_248

JayJay_249

JayJay_250
(lysin A)

JayJay_251
(holin)

JayJay_252
(lysin B)

JayJay_253
(terminase)

JayJay_254

JayJay_255

JayJay_256

JayJay_257

JayJay_258
(polynucleotide kinase)

JayJay_259

JayJay_260
(serine/threonine kinase)

JayJay_261

JayJay_262
(PurA-like adenylosuccinate synthetase)

JayJay_263

JayJay_264

JayJay_265

JayJay_266

JayJay_267

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ449569
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload