Mycobacterium phage Lethe
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Detailed Information for Phage Lethe
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByPaige Alexander
Year Found2024
Location FoundDahlonega, GA USA
Finding InstitutionUniversity of North Georgia
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates34.55437 N, 83.96678 W Map
Discovery NotesSoil was light brown, underwater (in river/lake),
smooth, silt like
Naming NotesI choose this name
because it is the name of the river to the underworld and it was found in a river/lake.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 16, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage1529
Genome length (bp)155828
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ablatia (C1)

Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Asterius (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

Babyland (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Belieber (C1)

BigCity (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Blackdragon (C1)

Blubba (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Capablanca (C1)

Caravan (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Chomp (C1)

CindyLou (C1)

Colt (C1)

Concombre (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

DeejaClivia (C1)

Delilah (C1)

Delylah (C1)

Demodog (C1)

Derek (C1)

Dietrick (C1)

DirtMonster (C1)

Domi (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EggyFarm (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

Fongie (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Gamgam (C1)

Ghost (C1)

Gizmo (C1)

GlutenPhree (C1)

Grasshills (C1)

Grungle (C1)

Guwapp (C1)

Halldule (C1)

HyRo (C1)

I3 (C1)

IkeLoa (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Issimir (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

JayJay (C1)

Jedediah (C1)

Jemmno (C1)

Jessibeth14 (C1)

Jezreel (C1)

JigglyPuff (C1)

JPickles (C1)

JulietS (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Labradorite (C1)

Latch (C1)

Lee7 (C1)

Lethe (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LordLeafolot (C1)

LRRHood (C1)

Lukilu (C1)

Maby2021 (C1)

Mangeria (C1)

Matsumoto (C1)

McGee (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Mikro (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Naval22 (C1)

NedWong (C1)

Ngannou (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

Primadonna (C1)

PurduePete (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Spec (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

SrishMeg2525 (C1)

StephanieG (C1)

Stubby (C1)

StubbySaigey (C1)

SVoro (C1)

Tainan (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yassified (C1)

YemiJoy2021 (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Greely (C2)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionUniversity of North Georgia
Annotation StatusIn GenBank
Plaque Notes1mm clear plaques with defined edges
MorphotypeMyoviridae
Number of Genes230
Number of tRNAs34
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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Lethe_1

Lethe_2

Lethe_3
(nucleotidyl transferase)

Lethe_4

Lethe_5

Lethe_6

Lethe_7

Lethe_8

Lethe_9

Lethe_10

Lethe_11

Lethe_12

Lethe_13

Lethe_14

Lethe_15

Lethe_16

Lethe_17

Lethe_18

Lethe_19

Lethe_20

Lethe_21

Lethe_22

Lethe_23

Lethe_24

Lethe_25

Lethe_26

Lethe_27

Lethe_28
(membrane protein, Band-7 -like)

Lethe_29

Lethe_30

Lethe_31

Lethe_32

Lethe_33

Lethe_34

Lethe_35

Lethe_36

Lethe_37

Lethe_38

Lethe_39

Lethe_40

Lethe_41

Lethe_42

Lethe_43

Lethe_44

Lethe_45

Lethe_46

Lethe_47

Lethe_48

Lethe_49

Lethe_50

Lethe_51

Lethe_52

Lethe_53

Lethe_54

Lethe_55
(helix-turn-helix DNA binding domain)

Lethe_56
(HNH endonuclease)

Lethe_57

Lethe_58

Lethe_59

Lethe_60

Lethe_61

Lethe_62
(helix-turn-helix DNA binding domain)

Lethe_63
(DNA binding protein)

Lethe_64

Lethe_65

Lethe_66

Lethe_67

Lethe_68

Lethe_69

Lethe_70

Lethe_71

Lethe_72

Lethe_73

Lethe_74

Lethe_75

Lethe_76

Lethe_77

Lethe_78

Lethe_79

Lethe_80

Lethe_81

Lethe_82

Lethe_83 — tRNA
(tRNA-Ser(gct))

Lethe_84 — tRNA
(tRNA-Leu(cag))

Lethe_85 — tRNA
(tRNA-Leu(gag))

Lethe_86 — tRNA
(tRNA-Leu(caa))

Lethe_87

Lethe_88

Lethe_89
(portal protein)

Lethe_90

Lethe_91

Lethe_92
(ThyX-like thymidylate synthase)

Lethe_93

Lethe_94
(RNA ligase)

Lethe_95

Lethe_96

Lethe_97

Lethe_98
(major capsid protein)

Lethe_99
(DNA binding protein)

Lethe_100

Lethe_101
(head fiber protein)

Lethe_102

Lethe_103

Lethe_104

Lethe_105

Lethe_106

Lethe_107

Lethe_108

Lethe_109

Lethe_110

Lethe_111

Lethe_112

Lethe_113

Lethe_114

Lethe_115

Lethe_116

Lethe_117

Lethe_118

Lethe_119

Lethe_120

Lethe_121

Lethe_122

Lethe_123

Lethe_124

Lethe_125
(tail sheath protein)

Lethe_126

Lethe_127

Lethe_128
(tail assembly chaperone)

Lethe_129
(tail assembly chaperone)

Lethe_130
(tape measure protein)

Lethe_131

Lethe_132

Lethe_133

Lethe_134
(minor tail protein)

Lethe_135
(minor tail protein)

Lethe_136

Lethe_137
(baseplate wedge protein)

Lethe_138
(baseplate wedge protein)

Lethe_139

Lethe_140

Lethe_141

Lethe_142

Lethe_143
(minor tail protein)

Lethe_144

Lethe_145

Lethe_146

Lethe_147

Lethe_148

Lethe_149

Lethe_150

Lethe_151 — tRNA
(tRNA-Pro(tgg))

Lethe_152 — tRNA
(tRNA-Trp(cca))

Lethe_153 — tRNA
(tRNA-Tyr(gta))

Lethe_154

Lethe_155
(peptidyl tRNA hydrolase)

Lethe_156 — tRNA
(tRNA-Pyl(cta))

Lethe_157 — tRNA
(tRNA-Met(cat))

Lethe_158 — tRNA
(tRNA-Cys(gca))

Lethe_159 — tRNA
(tRNA-Glu(ctc))

Lethe_160 — tRNA
(tRNA-His(gtg))

Lethe_161 — tRNA
(tRNA-Ala(tgc))

Lethe_162 — tRNA
(tRNA-Phe(gaa))

Lethe_163 — tRNA
(tRNA-Val(cac))

Lethe_164 — tRNA
(tRNA-Lys(ctt))

Lethe_165 — tRNA
(tRNA-Glu(ttc))

Lethe_166 — tRNA
(tRNA-Gly(tcc))

Lethe_167 — tRNA
(tRNA-Gly(tcc))

Lethe_168 — tRNA
(tRNA-Thr(cgt))

Lethe_169 — tRNA
(tRNA-Thr(tgt))

Lethe_170
(HNH endonuclease)

Lethe_171 — tRNA
(tRNA-Thr(ggt))

Lethe_172
(minor tail protein, D-ala-D-ala carboxypeptidase)

Lethe_173

Lethe_174 — tRNA
(tRNA-Gly(gcc))

Lethe_175 — tRNA
(tRNA-Asp(gtc))

Lethe_176 — tRNA
(tRNA-Met(cat))

Lethe_177 — tRNA
(tRNA-Ile(gat))

Lethe_178 — tRNA
(tRNA-Arg(acg))

Lethe_179 — tRNA
(tRNA-Val(gac))

Lethe_180 — tRNA
(tRNA-Arg(cct))

Lethe_181 — tmRNA
(Tag peptide: ATDTDATVTDAEIEAFFAEEAAALV*)

Lethe_182 — tRNA
(tRNA-Gln(ttg))

Lethe_183 — tRNA
(tRNA-Arg(tct))

Lethe_184 — tRNA
(tRNA-Lys(ttt))

Lethe_185

Lethe_186

Lethe_187

Lethe_188
(DNA helicase)

Lethe_189

Lethe_190

Lethe_191

Lethe_192

Lethe_193

Lethe_194

Lethe_195

Lethe_196

Lethe_197

Lethe_198
(thymidylate kinase)

Lethe_199
(aminotransferase)

Lethe_200

Lethe_201

Lethe_202
(DnaC-like helicase loader)

Lethe_203
(DnaB-like dsDNA helicase)

Lethe_204

Lethe_205
(DNA primase)

Lethe_206

Lethe_207
(chaperonin, DnaJ-like)

Lethe_208
(SSB protein)

Lethe_209
(DnaE-like DNA polymerase III (alpha))

Lethe_210
(RF-1 peptide chain release factor)

Lethe_211
(RecA-like DNA recombinase)

Lethe_212

Lethe_213

Lethe_214

Lethe_215
(RusA-like resolvase)

Lethe_216

Lethe_217

Lethe_218

Lethe_219

Lethe_220

Lethe_221

Lethe_222

Lethe_223 — tRNA
(tRNA-Gln(ctg))

Lethe_224 — tRNA
(tRNA-Asn(gtt))

Lethe_225

Lethe_226

Lethe_227

Lethe_228

Lethe_229

Lethe_230

Lethe_231
(Ro-like RNA binding protein)

Lethe_232

Lethe_233

Lethe_234

Lethe_235

Lethe_236

Lethe_237

Lethe_238
(glycosyltransferase)

Lethe_239

Lethe_240
(galactosyltransferase)

Lethe_241
(galactosyltransferase)

Lethe_242
(PnuC-like Nicotinamide riboside transporter)

Lethe_243
(glycosyltransferase)

Lethe_244

Lethe_245

Lethe_246

Lethe_247

Lethe_248
(lysin A)

Lethe_249
(holin)

Lethe_250
(lysin B)

Lethe_251
(terminase)

Lethe_252

Lethe_253

Lethe_254

Lethe_255

Lethe_256
(polynucleotide kinase)

Lethe_257

Lethe_258

Lethe_259
(serine/threonine kinase)

Lethe_260

Lethe_261

Lethe_262
(adenylosuccinate synthetase PurA-like)

Lethe_263

Lethe_264

Lethe_265

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV876977
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
EM PictureDownload
GenBank File for PhameratorDownload