Detailed Information for Phage Mikro |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Victoria Frost |
Year Found | 2021 |
Location Found | Rock Hill, SC United States of America |
Finding Institution | Winthrop University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 37°C |
GPS Coordinates | 34.940074 N, 81.033099 W Map |
Discovery Notes | Soil sample was collected under flower bed located at the Little Chapel on the Winthrop University campus. |
Naming Notes | I wanted to name it after a gemstone from my favorite TV show, and my plaques/phages have been quite small so far. No gems in the show were that small, so I decided to find the name of the world's smallest gem. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 3, 2022 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1503 |
Genome length (bp) | 157166 |
Character of genome ends | Circularly Permuted |
GC Content | 64.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | C |
Subcluster | C1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Winthrop University |
Annotation Status | In GenBank |
Plaque Notes | Plaques were always very tiny, about 3mm. |
Morphotype | Myoviridae |
Number of Genes | 228 |
Number of tRNAs | 32 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | ON456344 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
132 |
Pitt Freezer Box Grid# |
G10 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |