| Detailed Information for Phage Naija |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Charity Onwuchekwa |
| Year Found | 2017 |
| Location Found | Washington, DC USA |
| Finding Institution | Howard University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 38.9223 N, 77.0218 W Map |
| Discovery Notes | Location: Howard Sign
2400 Georgia Avenue, Washington D.C 20059
In front of blue, red, and white Howard Sign facing Bannekar Track. Our location of the soil the next to small flower bushes in front of the sign. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 21, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 529 |
| Genome length (bp) | 155256 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Morphotype | Myoviridae |
| Number of Genes | 233 |
| Number of tRNAs | 33 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK359339 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
9.75x10^9 pfu/mL |
| Pitt Freezer Box# |
53 |
| Pitt Freezer Box Grid# |
C3 |
| Available Files |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |