Mycobacterium phage Naija
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Detailed Information for Phage Naija
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByCharity Onwuchekwa
Year Found2017
Location FoundWashington, DC USA
Finding InstitutionHoward University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates38.9223 N, 77.0218 W Map
Discovery NotesLocation: Howard Sign
2400 Georgia Avenue, Washington D.C 20059

In front of blue, red, and white Howard Sign facing Bannekar Track. Our location of the soil the next to small flower bushes in front of the sign.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 21, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage529
Genome length (bp)155256
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Asterius (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

Babyland (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

BigCity (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Blackdragon (C1)

Blubba (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Capablanca (C1)

Caravan (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Chomp (C1)

CindyLou (C1)

Colt (C1)

Concombre (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Delylah (C1)

Demodog (C1)

Derek (C1)

Dietrick (C1)

DirtMonster (C1)

Domi (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EggyFarm (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Gamgam (C1)

Ghost (C1)

Gizmo (C1)

Grasshills (C1)

Grungle (C1)

Guwapp (C1)

Halldule (C1)

HyRo (C1)

I3 (C1)

IkeLoa (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Issimir (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

JayJay (C1)

Jedediah (C1)

Jemmno (C1)

Jessibeth14 (C1)

JigglyPuff (C1)

JPickles (C1)

JulietS (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

Lee7 (C1)

Lethe (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LordLeafolot (C1)

LRRHood (C1)

Lukilu (C1)

Maby2021 (C1)

Mangeria (C1)

Matsumoto (C1)

McGee (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Mikro (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Naval22 (C1)

NedWong (C1)

Ngannou (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

PurduePete (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Spec (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

SrishMeg2525 (C1)

StephanieG (C1)

Stubby (C1)

StubbySaigey (C1)

Tainan (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yassified (C1)

YemiJoy2021 (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Greely (C2)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeMyoviridae
Number of Genes233
Number of tRNAs33
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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Naija_1

Naija_2

Naija_3
(nucleotidyltransferase)

Naija_4

Naija_5

Naija_6

Naija_7

Naija_8

Naija_9

Naija_10

Naija_11

Naija_12

Naija_13

Naija_14

Naija_15

Naija_16

Naija_17
(histidine triad nucleotide binding protein)

Naija_18

Naija_19

Naija_20

Naija_21

Naija_22

Naija_23

Naija_24

Naija_25
(HNH endonuclease)

Naija_26

Naija_27

Naija_28

Naija_29

Naija_30

Naija_31

Naija_32

Naija_33

Naija_34

Naija_35
(ribbon-helix-helix DNA binding protein)

Naija_36

Naija_37

Naija_38

Naija_39

Naija_40

Naija_41

Naija_42

Naija_43

Naija_44

Naija_45

Naija_46

Naija_47

Naija_48

Naija_49

Naija_50

Naija_51

Naija_52

Naija_53

Naija_54

Naija_55

Naija_56

Naija_57

Naija_58

Naija_59

Naija_60

Naija_61
(helix-turn-helix DNA binding domain protein)

Naija_62
(helix-turn-helix DNA binding protein)

Naija_63

Naija_64

Naija_65

Naija_66

Naija_67

Naija_68

Naija_69

Naija_70

Naija_71

Naija_72

Naija_73

Naija_74

Naija_75

Naija_76

Naija_77

Naija_78

Naija_79

Naija_80

Naija_81

Naija_82

Naija_83 — tRNA
(tRNA-Ser(gct))

Naija_84 — tRNA
(tRNA-Leu(cag))

Naija_85 — tRNA
(tRNA-Leu(gag))

Naija_86 — tRNA
(tRNA-Leu(caa))

Naija_87

Naija_88

Naija_89
(portal protein)

Naija_90

Naija_91

Naija_92
(ThyX-like thymidylate synthase)

Naija_93

Naija_94
(RNA ligase)

Naija_95
(HNH endonuclease)

Naija_96

Naija_97

Naija_98

Naija_99
(major capsid protein)

Naija_100

Naija_101

Naija_102

Naija_103

Naija_104

Naija_105

Naija_106

Naija_107

Naija_108

Naija_109

Naija_110

Naija_111

Naija_112

Naija_113

Naija_114

Naija_115

Naija_116

Naija_117

Naija_118

Naija_119

Naija_120
(acetyltransferase)

Naija_121

Naija_122

Naija_123

Naija_124

Naija_125

Naija_126

Naija_127
(tail sheath protein)

Naija_128

Naija_129

Naija_130
(tail assembly chaperone)

Naija_131
(tail assembly chaperone)

Naija_132
(tape measure protein)

Naija_133
(minor tail protein)

Naija_134

Naija_135

Naija_136
(minor tail protein)

Naija_137

Naija_138

Naija_139
(baseplate wedge protein)

Naija_140
(baseplate wedge protein)

Naija_141

Naija_142

Naija_143

Naija_144
(minor tail protein)

Naija_145
(minor tail protein)

Naija_146

Naija_147

Naija_148

Naija_149

Naija_150

Naija_151

Naija_152

Naija_153

Naija_154 — tRNA
(tRNA-Pro(tgg))

Naija_155 — tRNA
(tRNA-Trp(cca))

Naija_156 — tRNA
(tRNA-Tyr(gta))

Naija_157

Naija_158
(peptidyl tRNA hydrolase)

Naija_159 — tRNA

Naija_160 — tRNA
(tRNA-Met(cat))

Naija_161 — tRNA
(tRNA-Cys(gca))

Naija_162 — tRNA
(tRNA-Glu(ctc))

Naija_163 — tRNA
(tRNA-His(gtg))

Naija_164 — tRNA
(tRNA-Ala(tgc))

Naija_165 — tRNA
(tRNA-Phe(gaa))

Naija_166 — tRNA
(tRNA-Val(cac))

Naija_167 — tRNA
(tRNA-Lys(ctt))

Naija_168 — tRNA
(tRNA-Glu(ttc))

Naija_169 — tRNA
(tRNA-Gly(tcc))

Naija_170 — tRNA
(tRNA-Thr(cgt))

Naija_171 — tRNA
(tRNA-Thr(tgt))

Naija_172
(HNH endonuclease)

Naija_173 — tRNA
(tRNA-Thr(ggt))

Naija_174
(minor tail protein)

Naija_175

Naija_176 — tRNA
(tRNA-Gly(gcc))

Naija_177 — tRNA
(tRNA-Asp(gtc))

Naija_178 — tRNA
(tRNA-Met(cat))

Naija_179 — tRNA
(tRNA-Ile(gat))

Naija_180 — tRNA
(tRNA-Arg(acg))

Naija_181 — tRNA
(tRNA-Val(gac))

Naija_182 — tRNA
(tRNA-Arg(cct))

Naija_183 — tmRNA
(tmRNA)

Naija_184 — tRNA
(tRNA-Gln(ttg))

Naija_185 — tRNA
(tRNA-Arg(tct))

Naija_186 — tRNA
(tRNA-Lys(ttt))

Naija_187

Naija_188
(DNA helicase)

Naija_189

Naija_190

Naija_191

Naija_192

Naija_193

Naija_194

Naija_195

Naija_196

Naija_197

Naija_198
(thymidylate kinase)

Naija_199
(aminotransferase)

Naija_200

Naija_201

Naija_202

Naija_203
(DnaC-like helicase loader)

Naija_204
(DnaB-like dsDNA helicase)

Naija_205

Naija_206
(DNA primase)

Naija_207

Naija_208
(DnaJ-like chaperonin)

Naija_209
(ssDNA binding protein)

Naija_210
(DnaE-like DNA polymerase III)

Naija_211
(RF-1 peptide chain release factor)

Naija_212
(RecA-like DNA recombinase)

Naija_213
(holliday junction resolvase)

Naija_214

Naija_215
(HNH endonuclease)

Naija_216
(RusA-like resolvase)

Naija_217

Naija_218

Naija_219

Naija_220

Naija_221

Naija_222

Naija_223

Naija_224 — tRNA
(tRNA-Gln(ctg))

Naija_225 — tRNA
(tRNA-Asn(gtt))

Naija_226

Naija_227

Naija_228

Naija_229

Naija_230

Naija_231

Naija_232

Naija_233

Naija_234
(Ro-like RNA binding protein)

Naija_235

Naija_236

Naija_237

Naija_238

Naija_239

Naija_240

Naija_241
(glycosyltransferase)

Naija_242

Naija_243
(glycosyltransferase)

Naija_244
(glycosyltransferase)

Naija_245
(PnuC-like nicotinamide riboside transporter)

Naija_246
(glycosyltransferase)

Naija_247

Naija_248

Naija_249

Naija_250

Naija_251
(lysin A)

Naija_252

Naija_253
(lysin B)

Naija_254
(terminase)

Naija_255

Naija_256

Naija_257

Naija_258

Naija_259
(polynucleotide kinase)

Naija_260

Naija_261
(serine/threonine kinase)

Naija_262

Naija_263

Naija_264
(PurA-like adenylosuccinate synthetase)

Naija_265

Naija_266

Naija_267

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK359339
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 9.75x10^9 pfu/mL
Pitt Freezer Box# 53
Pitt Freezer Box Grid# C3
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload