| Detailed Information for Phage Naval22 |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Emily Kleiner, Joie Palmer |
| Year Found | 2022 |
| Location Found | North Charleston, SC United States |
| Finding Institution | College of Charleston |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 37°C |
| GPS Coordinates | 32.86855 N, 79.96549 W Map |
| Discovery Notes | Outside Temp: 30 degrees Celsius
Humidity: 76%
Sample was collected by Joie Palmer in a marine, marsh area connected to Naval Park pier. Traffic from cargo ships was moderate. Small colonies of marine life (crabs) and mosquitos surrounded the collection spot, as well as rocks. Joie Palmer performed the enrichment and Emily Kleiner did most of the subsequent purifications and analysis on the virus, working at times in collaboration with Joie Palmer. |
| Naming Notes | Named after the location |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 20, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 631 |
| Genome length (bp) | 157296 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | College of Charleston |
| Annotation Status | Being Annotated (Expected completion by 12/15/2024) |
| Morphotype | Myoviridae |
| Number of Genes | 238 |
| Number of tRNAs | 33 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
163 |
| Pitt Freezer Box Grid# |
H11 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
