Mycobacterium phage NedWong
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Detailed Information for Phage NedWong
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMario Perez-Ahuatl
Year Found2022
Location FoundWest Lafayette, IN United States America
Finding InstitutionPurdue University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature22°C
GPS Coordinates40.43486 N, 86.92427 W Map
Discovery NotesOther discoverers were Nick Craft, Jenna McLean, and Lauren Daver. It was discovered behind an apartment complex, near trees and bushes. The soil was mostly dry.
Naming NotesI love Marvel movies and two of my favorite characters are Ned and Wong from those movies.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 13, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage361
Genome length (bp)155173
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Asterius (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

Babyland (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

BigCity (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Blackdragon (C1)

Blubba (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Capablanca (C1)

Caravan (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Chomp (C1)

CindyLou (C1)

Colt (C1)

Concombre (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Delylah (C1)

Demodog (C1)

Derek (C1)

Dietrick (C1)

DirtMonster (C1)

Domi (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EggyFarm (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Gamgam (C1)

Ghost (C1)

Gizmo (C1)

Grasshills (C1)

Grungle (C1)

Guwapp (C1)

Halldule (C1)

HyRo (C1)

I3 (C1)

IkeLoa (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Issimir (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

JayJay (C1)

Jedediah (C1)

Jemmno (C1)

Jessibeth14 (C1)

JigglyPuff (C1)

JPickles (C1)

JulietS (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

Lee7 (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LordLeafolot (C1)

LRRHood (C1)

Lukilu (C1)

Maby2021 (C1)

Mangeria (C1)

Matsumoto (C1)

McGee (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Mikro (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Naval22 (C1)

NedWong (C1)

Ngannou (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

PurduePete (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Spec (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

SrishMeg2525 (C1)

StephanieG (C1)

Stubby (C1)

StubbySaigey (C1)

Tainan (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yassified (C1)

YemiJoy2021 (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Greely (C2)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionPurdue University
Annotation StatusIn GenBank
Plaque NotesThe plaques that were formed were smaller round plaques, some being slightly larger than others.
MorphotypeMyoviridae
Number of Genes233
Number of tRNAs32
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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NedWong_1

NedWong_2

NedWong_3
(nucleotidyl transferase)

NedWong_4

NedWong_5

NedWong_6

NedWong_7

NedWong_8

NedWong_9

NedWong_10

NedWong_11

NedWong_12

NedWong_13

NedWong_14

NedWong_15

NedWong_16

NedWong_17

NedWong_18

NedWong_19
(histidine triad nucleotide binding protein)

NedWong_20

NedWong_21

NedWong_22

NedWong_23

NedWong_24

NedWong_25

NedWong_26

NedWong_27

NedWong_28

NedWong_29

NedWong_30
(band-7-like membrane protein)

NedWong_31

NedWong_32

NedWong_33

NedWong_34

NedWong_35

NedWong_36
(ribbon-helix-helix DNA binding domain protein)

NedWong_37

NedWong_38

NedWong_39

NedWong_40

NedWong_41

NedWong_42

NedWong_43

NedWong_44

NedWong_45

NedWong_46

NedWong_47

NedWong_48

NedWong_49

NedWong_50

NedWong_51

NedWong_52

NedWong_53

NedWong_54

NedWong_55

NedWong_56

NedWong_57
(helix-turn-helix DNA binding domain protein)

NedWong_58
(HNH endonuclease)

NedWong_59

NedWong_60

NedWong_61

NedWong_62

NedWong_63

NedWong_64
(helix-turn-helix DNA binding domain protein)

NedWong_65
(helix-turn-helix DNA binding domain protein)

NedWong_66

NedWong_67

NedWong_68

NedWong_69

NedWong_70

NedWong_71

NedWong_72

NedWong_73

NedWong_74

NedWong_75

NedWong_76

NedWong_77

NedWong_78

NedWong_79

NedWong_80

NedWong_81

NedWong_82

NedWong_83

NedWong_84

NedWong_85 — tRNA
(tRNA-Ser(gct))

NedWong_86 — tRNA
(tRNA-Leu(cag))

NedWong_87 — tRNA
(tRNA-Leu(gag))

NedWong_88 — tRNA
(tRNA-Leu(caa))

NedWong_89

NedWong_90

NedWong_91
(portal protein)

NedWong_92

NedWong_93

NedWong_94
(ThyX-like thymidylate synthase)

NedWong_95

NedWong_96
(RNA ligase)

NedWong_97

NedWong_98

NedWong_99

NedWong_100
(major capsid protein)

NedWong_101
(Holliday junction resolvase)

NedWong_102

NedWong_103
(head fiber protein)

NedWong_104

NedWong_105

NedWong_106

NedWong_107

NedWong_108

NedWong_109

NedWong_110

NedWong_111

NedWong_112

NedWong_113

NedWong_114

NedWong_115

NedWong_116

NedWong_117

NedWong_118

NedWong_119

NedWong_120

NedWong_121

NedWong_122
(acetyltransferase)

NedWong_123

NedWong_124

NedWong_125

NedWong_126

NedWong_127

NedWong_128
(tail sheath protein)

NedWong_129

NedWong_130

NedWong_131
(tail assembly chaperone)

NedWong_132
(tail assembly chaperone)

NedWong_133
(tape measure protein)

NedWong_134
(minor tail protein)

NedWong_135

NedWong_136

NedWong_137
(minor tail protein)

NedWong_138

NedWong_139

NedWong_140
(baseplate wedge protein)

NedWong_141
(baseplate J protein)

NedWong_142

NedWong_143

NedWong_144

NedWong_145
(minor tail protein)

NedWong_146
(minor tail protein)

NedWong_147

NedWong_148

NedWong_149

NedWong_150

NedWong_151

NedWong_152

NedWong_153

NedWong_154 — tRNA
(tRNA-Pro(tgg))

NedWong_155 — tRNA
(tRNA-Trp(cca))

NedWong_156

NedWong_157
(peptidyl tRNA hydrolase)

NedWong_158 — tRNA
(tRNA-pyl(cta))

NedWong_159 — tRNA
(tRNA-Met(cat))

NedWong_160 — tRNA
(tRNA-Cys(gca))

NedWong_161 — tRNA
(tRNA-Glu(ctc))

NedWong_162 — tRNA
(tRNA-His(gtg))

NedWong_163 — tRNA
(tRNA-Ala(tgc))

NedWong_164 — tRNA
(tRNA-Phe(gaa))

NedWong_165 — tRNA
(tRNA-Val(cac))

NedWong_166 — tRNA
(tRNA-Lys(ctt))

NedWong_167 — tRNA
(tRNA-Glu(ttc))

NedWong_168 — tRNA
(tRNA-Gly(tcc))

NedWong_169 — tRNA
(tRNA-Thr(cgt))

NedWong_170 — tRNA
(tRNA-Thr(tgt))

NedWong_171 — tRNA
(tRNA-Thr(ggt))

NedWong_172
(minor tail protein)

NedWong_173

NedWong_174 — tRNA
(tRNA-Gly(gcc))

NedWong_175 — tRNA
(tRNA-Asp(gtc))

NedWong_176 — tRNA
(tRNA-Met(cat))

NedWong_177 — tRNA
(tRNA-Ile(gat))

NedWong_178 — tRNA
(tRNA-Arg(acg))

NedWong_179 — tRNA
(tRNA-Val(gac))

NedWong_180 — tRNA
(tRNA-Arg(cct))

NedWong_181 — tmRNA
(Tag peptide: ATDTDATVTDAEIEAFFAEEAAALV*)

NedWong_182 — tRNA
(tRNA-Gln(ttg))

NedWong_183 — tRNA
(tRNA-Arg(tct))

NedWong_184 — tRNA
(tRNA-Lys(ttt))

NedWong_185

NedWong_186

NedWong_187
(DNA helicase)

NedWong_188

NedWong_189

NedWong_190

NedWong_191

NedWong_192

NedWong_193

NedWong_194

NedWong_195

NedWong_196

NedWong_197
(thymidylate kinase)

NedWong_198
(aminotransferase)

NedWong_199

NedWong_200

NedWong_201
(DnaC-like helicase loader)

NedWong_202
(DnaB-like dsDNA helicase)

NedWong_203

NedWong_204
(DNA primase)

NedWong_205

NedWong_206
(DnaJ-like chaperonin)

NedWong_207
(SSB protein)

NedWong_208
(DNA polymerase)

NedWong_209
(RF-1 peptide chain release factor)

NedWong_210
(RecA-like DNA recombinase)

NedWong_211
(Holliday junction resolvase)

NedWong_212

NedWong_213
(HNH endonuclease)

NedWong_214
(RusA-like resolvase)

NedWong_215

NedWong_216

NedWong_217

NedWong_218

NedWong_219

NedWong_220

NedWong_221

NedWong_222 — tRNA
(tRNA-Gln(ctg))

NedWong_223 — tRNA
(tRNA-Asn(gtt))

NedWong_224

NedWong_225

NedWong_226

NedWong_227

NedWong_228

NedWong_229

NedWong_230

NedWong_231

NedWong_232
(Ro-like RNA binding protein)

NedWong_233

NedWong_234

NedWong_235

NedWong_236

NedWong_237

NedWong_238

NedWong_239
(glycosyltransferase)

NedWong_240

NedWong_241
(glycosyltransferase)

NedWong_242
(glycosyltransferase)

NedWong_243
(PnuC-like nicotinamide riboside transporter)

NedWong_244
(glycosyltransferase)

NedWong_245

NedWong_246

NedWong_247

NedWong_248

NedWong_249
(lysin A)

NedWong_250
(holin)

NedWong_251
(lysin B)

NedWong_252
(terminase)

NedWong_253

NedWong_254

NedWong_255

NedWong_256

NedWong_257
(polynucleotide kinase)

NedWong_258

NedWong_259

NedWong_260
(serine/threonine kinase)

NedWong_261

NedWong_262

NedWong_263
(PurA-like adenylosuccinate synthetase)

NedWong_264

NedWong_265

NedWong_266

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR475290
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 157
Pitt Freezer Box Grid# E6
Available Files
GenBank File for PhameratorDownload