| Detailed Information for Phage NoodleTree |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Lydia Flores, Madeleine Reyes, Michael Leyzerzon |
| Year Found | 2016 |
| Location Found | Plano, TX USA |
| Finding Institution | Collin College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 37°C |
| GPS Coordinates | 33.05 N, 96.68 W Map |
| Discovery Notes | The phage was found next to a tree that is very close in proximity to a fountain on Collin College's Spring Creek campus. It was found under mulch. |
| Naming Notes | The name NoodleTree was chosen due to Lydia's appreciation for education. "I come to school to grow my noodle." - Lydia Flores |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 2, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 83 |
| Genome length (bp) | 151100 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Collin College |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques appeared to be small in size, but plentiful high concentration and lower dilutions. The attached photograph contains a phage with a 10^-2 concentration. |
| Morphotype | Myoviridae |
| Number of Genes | 225 |
| Number of tRNAs | 32 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK359346 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
32 |
| Pitt Freezer Box Grid# |
G3 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |
