| Detailed Information for Phage Phlegm |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Justin Cicarelli |
| Year Found | 2017 |
| Location Found | Philadelphia, PA USA |
| Finding Institution | Drexel University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 39.953976 N, 75.189064 W Map |
| Discovery Notes | Date of sample collection: October 4th, 2017
Time of sample collection: 11:24am
Depth of soil dug: 1.5 inches
Approximate Temperature: 70 degrees Fahrenheit
General Location: Drexel Campus, side entrance of Papadakis Integrated Sciences Building
Sample Site Description: near foliage, dry medium-brown soil |
| Naming Notes | I liked the name phlegm since it has a ph like there is in phage and thought it was funny. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 31, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 537 |
| Genome length (bp) | 155959 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Drexel University |
| Annotation Status | In GenBank |
| Plaque Notes | Titer: 1.5 x 10^10 pfu/ml |
| Morphotype | Myoviridae |
| Number of Genes | 237 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH697590 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
61 |
| Pitt Freezer Box Grid# |
B8 |
| Available Files |
| GenBank File for Phamerator | Download |