Detailed Information for Phage Phusco |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Grant Rybnicky |
Year Found | 2013 |
Location Found | Hamilton, NJ USA |
Finding Institution | James Madison University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.178194 N, 74.630944 W Map |
Discovery Notes | Soil collected from the Richard Stockton rest stop on the NJ Turnpike. The sample was collected near the side walk under the shade of a tree. Came from the same soil sample as the mycobacteriophage Turnpike. |
Naming Notes | The name is derived from the last name of my sophmore year Biotechnology teacher in high school. His name is David Fusco, but many "f" sounds in phage research are replaced with "ph". |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 29, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 712 |
Genome length (bp) | 155060 |
Character of genome ends | Circularly Permuted |
GC Content | 64.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | C |
Subcluster | C1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Myoviridae |
Number of Genes | 232 |
Number of tRNAs | 33 |
Number of tmRNAs | 1 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK359321 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
9 |
Pitt Freezer Box Grid# |
E4 |
Available Files |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |