Mycobacterium phage Pivoine
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Detailed Information for Phage Pivoine
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByChau Pham
Year Found2017
Location FoundAnnandale, VA USA
Finding InstitutionGeorge Mason University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature22°C
GPS Coordinates38.8375 N, 77.162222 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 5, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage482
Genome length (bp)155256
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Asterius (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

Babyland (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

BigCity (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Blackdragon (C1)

Blubba (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Capablanca (C1)

Caravan (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Chomp (C1)

CindyLou (C1)

Colt (C1)

Concombre (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Delylah (C1)

Demodog (C1)

Derek (C1)

Dietrick (C1)

DirtMonster (C1)

Domi (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EggyFarm (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Gamgam (C1)

Ghost (C1)

Gizmo (C1)

Grasshills (C1)

Grungle (C1)

Guwapp (C1)

Halldule (C1)

HyRo (C1)

I3 (C1)

IkeLoa (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Issimir (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

JayJay (C1)

Jedediah (C1)

Jemmno (C1)

Jessibeth14 (C1)

JigglyPuff (C1)

JPickles (C1)

JulietS (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

Lee7 (C1)

Lethe (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LordLeafolot (C1)

LRRHood (C1)

Lukilu (C1)

Maby2021 (C1)

Mangeria (C1)

Matsumoto (C1)

McGee (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Mikro (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Naval22 (C1)

NedWong (C1)

Ngannou (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

PurduePete (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Spec (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

SrishMeg2525 (C1)

StephanieG (C1)

Stubby (C1)

StubbySaigey (C1)

Tainan (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yassified (C1)

YemiJoy2021 (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Greely (C2)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque Notesclear plaque
MorphotypeMyoviridae
Number of Genes233
Number of tRNAs33
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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Pivoine_1

Pivoine_2

Pivoine_3
(nucleotidyltransferase)

Pivoine_4

Pivoine_5

Pivoine_6

Pivoine_7

Pivoine_8

Pivoine_9

Pivoine_10

Pivoine_11

Pivoine_12

Pivoine_13

Pivoine_14

Pivoine_15

Pivoine_16

Pivoine_17
(histidine triad nucleotide binding protein)

Pivoine_18

Pivoine_19

Pivoine_20

Pivoine_21

Pivoine_22

Pivoine_23

Pivoine_24

Pivoine_25

Pivoine_26

Pivoine_27

Pivoine_28

Pivoine_29

Pivoine_30

Pivoine_31

Pivoine_32

Pivoine_33

Pivoine_34

Pivoine_35
(ribbon-helix-helix DNA binding protein)

Pivoine_36

Pivoine_37

Pivoine_38

Pivoine_39

Pivoine_40

Pivoine_41

Pivoine_42

Pivoine_43

Pivoine_44

Pivoine_45

Pivoine_46

Pivoine_47

Pivoine_48

Pivoine_49

Pivoine_50

Pivoine_51

Pivoine_52

Pivoine_53

Pivoine_54

Pivoine_55

Pivoine_56

Pivoine_57

Pivoine_58

Pivoine_59

Pivoine_60

Pivoine_61
(helix-turn-helix DNA binding domain protein)

Pivoine_62
(helix-turn-helix DNA binding protein)

Pivoine_63

Pivoine_64

Pivoine_65

Pivoine_66

Pivoine_67

Pivoine_68

Pivoine_69

Pivoine_70

Pivoine_71

Pivoine_72

Pivoine_73

Pivoine_74

Pivoine_75

Pivoine_76

Pivoine_77

Pivoine_78

Pivoine_79

Pivoine_80

Pivoine_81

Pivoine_82

Pivoine_83 — tRNA
(tRNA-Ser(gct))

Pivoine_84 — tRNA
(tRNA-Leu(cag))

Pivoine_85 — tRNA
(tRNA-Leu(gag))

Pivoine_86 — tRNA
(tRNA-Leu(caa))

Pivoine_87

Pivoine_88

Pivoine_89
(portal protein)

Pivoine_90

Pivoine_91

Pivoine_92
(ThyX-like thymidylate synthase)

Pivoine_93

Pivoine_94
(RNA ligase)

Pivoine_95
(HNH endonuclease)

Pivoine_96

Pivoine_97

Pivoine_98

Pivoine_99
(major capsid protein)

Pivoine_100

Pivoine_101

Pivoine_102

Pivoine_103

Pivoine_104

Pivoine_105

Pivoine_106

Pivoine_107

Pivoine_108

Pivoine_109

Pivoine_110

Pivoine_111

Pivoine_112

Pivoine_113

Pivoine_114

Pivoine_115

Pivoine_116

Pivoine_117

Pivoine_118

Pivoine_119

Pivoine_120
(acetyltransferase)

Pivoine_121

Pivoine_122

Pivoine_123

Pivoine_124

Pivoine_125

Pivoine_126

Pivoine_127
(tail sheath protein)

Pivoine_128

Pivoine_129

Pivoine_130
(tail assembly chaperone)

Pivoine_131
(tail assembly chaperone)

Pivoine_132
(tape measure protein)

Pivoine_133
(minor tail protein)

Pivoine_134

Pivoine_135

Pivoine_136
(minor tail protein)

Pivoine_137

Pivoine_138

Pivoine_139
(baseplate wedge protein)

Pivoine_140
(baseplate wedge protein)

Pivoine_141

Pivoine_142

Pivoine_143

Pivoine_144
(minor tail protein)

Pivoine_145
(minor tail protein)

Pivoine_146

Pivoine_147

Pivoine_148

Pivoine_149

Pivoine_150

Pivoine_151

Pivoine_152

Pivoine_153

Pivoine_154 — tRNA
(tRNA-Pro(tgg))

Pivoine_155 — tRNA
(tRNA-Trp(cca))

Pivoine_156 — tRNA
(tRNA-Tyr(gta))

Pivoine_157

Pivoine_158
(peptidyl tRNA hydrolase)

Pivoine_159 — tRNA

Pivoine_160 — tRNA
(tRNA-Met(cat))

Pivoine_161 — tRNA
(tRNA-Cys(gca))

Pivoine_162 — tRNA
(tRNA-Glu(ctc))

Pivoine_163 — tRNA
(tRNA-His(gtg))

Pivoine_164 — tRNA
(tRNA-Ala(tgc))

Pivoine_165 — tRNA
(tRNA-Phe(gaa))

Pivoine_166 — tRNA
(tRNA-Val(cac))

Pivoine_167 — tRNA
(tRNA-Lys(ctt))

Pivoine_168 — tRNA
(tRNA-Glu(ttc))

Pivoine_169 — tRNA
(tRNA-Gly(tcc))

Pivoine_170 — tRNA
(tRNA-Thr(cgt))

Pivoine_171 — tRNA
(tRNA-Thr(tgt))

Pivoine_172
(HNH endonuclease)

Pivoine_173 — tRNA
(tRNA-Thr(ggt))

Pivoine_174
(minor tail protein)

Pivoine_175

Pivoine_176 — tRNA
(tRNA-Gly(gcc))

Pivoine_177 — tRNA
(tRNA-Asp(gtc))

Pivoine_178 — tRNA
(tRNA-Met(cat))

Pivoine_179 — tRNA
(tRNA-Ile(gat))

Pivoine_180 — tRNA
(tRNA-Arg(acg))

Pivoine_181 — tRNA
(tRNA-Val(gac))

Pivoine_182 — tRNA
(tRNA-Arg(cct))

Pivoine_183 — tmRNA
(tmRNA)

Pivoine_184 — tRNA
(tRNA-Gln(ttg))

Pivoine_185 — tRNA
(tRNA-Arg(tct))

Pivoine_186 — tRNA
(tRNA-Lys(ttt))

Pivoine_187

Pivoine_188
(DNA helicase)

Pivoine_189

Pivoine_190

Pivoine_191

Pivoine_192

Pivoine_193

Pivoine_194

Pivoine_195

Pivoine_196

Pivoine_197

Pivoine_198
(thymidylate kinase)

Pivoine_199
(aminotransferase)

Pivoine_200

Pivoine_201

Pivoine_202

Pivoine_203
(DnaC-like helicase loader)

Pivoine_204
(DnaB-like dsDNA helicase)

Pivoine_205

Pivoine_206
(DNA primase)

Pivoine_207

Pivoine_208
(DnaJ-like chaperonin)

Pivoine_209
(ssDNA binding protein)

Pivoine_210
(DnaE-like DNA polymerase III)

Pivoine_211
(RF-1 peptide chain release factor)

Pivoine_212
(RecA-like DNA recombinase)

Pivoine_213
(holliday junction resolvase)

Pivoine_214

Pivoine_215
(HNH endonuclease)

Pivoine_216
(RusA-like resolvase)

Pivoine_217

Pivoine_218

Pivoine_219

Pivoine_220

Pivoine_221

Pivoine_222

Pivoine_223

Pivoine_224 — tRNA
(tRNA-Gln(ctg))

Pivoine_225 — tRNA
(tRNA-Asn(gtt))

Pivoine_226

Pivoine_227

Pivoine_228

Pivoine_229

Pivoine_230

Pivoine_231

Pivoine_232

Pivoine_233

Pivoine_234
(Ro-like RNA binding protein)

Pivoine_235

Pivoine_236

Pivoine_237

Pivoine_238

Pivoine_239

Pivoine_240

Pivoine_241
(glycosyltransferase)

Pivoine_242

Pivoine_243
(glycosyltransferase)

Pivoine_244
(glycosyltransferase)

Pivoine_245
(PnuC-like nicotinamide riboside transporter)

Pivoine_246
(glycosyltransferase)

Pivoine_247

Pivoine_248

Pivoine_249

Pivoine_250

Pivoine_251
(lysin A)

Pivoine_252

Pivoine_253
(lysin B)

Pivoine_254
(terminase)

Pivoine_255

Pivoine_256

Pivoine_257

Pivoine_258

Pivoine_259
(polynucleotide kinase)

Pivoine_260

Pivoine_261
(serine/threonine kinase)

Pivoine_262

Pivoine_263

Pivoine_264
(PurA-like adenylosuccinate synthetase)

Pivoine_265

Pivoine_266

Pivoine_267

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK359326
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.6 x 10^9
Date of SEA Lysate Titering Jul 17, 2017
Pitt Freezer Box# 46
Pitt Freezer Box Grid# H10
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload