Detailed Information for Phage PurduePete |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Mallory Motz |
Year Found | 2022 |
Location Found | West Lafayette, IN United States |
Finding Institution | Purdue University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 17°C |
GPS Coordinates | 40.42704 N, 86.90974 W Map |
Discovery Notes | It was taken from the landscaping on the side of Shoemaker Cooperative. The sample was collected at approximately 12:05 pm on 9/13/2022. The temperature was 62 degrees Fahrenheit, and the humidity was at 87%. The moisture content of the soil was approximately 20% and it was taken from about 2 inches under the surface. |
Naming Notes | The name of the phage was decided because it was named after the mascot of Purdue University, Purdue Pete. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 13, 2022 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 303 |
Genome length (bp) | 156193 |
Character of genome ends | Circularly Permuted |
GC Content | 64.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | C |
Subcluster | C1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Purdue University |
Annotation Status | In GenBank |
Morphotype | Myoviridae |
Number of Genes | 234 |
Number of tRNAs | 33 |
Number of tmRNAs | 1 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OR613483 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
157 |
Pitt Freezer Box Grid# |
E7 |
Available Files |
GenBank File for Phamerator | Download |