Mycobacterium phage Sebata
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Detailed Information for Phage Sebata
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMantha Makume
Year Found2008
Location FoundKwazulu-Natal, South Africa
Finding InstitutionUniversity of Kwazulu-Natal
ProgramMycobacterial Genetics Course, Durban, South Africa
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates28.2198 S, 31.9519 E Map
Discovery NotesFound in the Zimbali Game Reserve.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 1, 2011
Sequencing FacilityPittsburgh Bacteriophage Institute
Genome length (bp)155286
Character of genome endsCircularly Permuted
GC Content64.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Asterius (C1)

Astraea (C1)

Atlantean (C1)

Audrick (C1)

Ava3 (C1)

Babyland (C1)

BackyardAgain (C1)

BadAgartude (C1)

BananaFence (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

BigCity (C1)

Bigswole (C1)

Bipolarisk (C1)

Blackbrain (C1)

Blackdragon (C1)

Blubba (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cactojaque (C1)

Cali (C1)

Cane17 (C1)

Capablanca (C1)

Caravan (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChaylaJr (C1)

ChickenPhender (C1)

Chomp (C1)

CindyLou (C1)

Colt (C1)

Concombre (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Delylah (C1)

Demodog (C1)

Derek (C1)

Dietrick (C1)

DirtMonster (C1)

Domi (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EasyJones (C1)

EggyFarm (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Gamgam (C1)

Ghost (C1)

Gizmo (C1)

Grasshills (C1)

Grungle (C1)

Guwapp (C1)

Halldule (C1)

HyRo (C1)

I3 (C1)

IkeLoa (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Issimir (C1)

Izajani (C1)

Janiyra (C1)

Jaygup (C1)

JayJay (C1)

Jedediah (C1)

Jemmno (C1)

Jessibeth14 (C1)

JigglyPuff (C1)

JPickles (C1)

JulietS (C1)

JustHall (C1)

Kamryn (C1)

Kboogie (C1)

Khaleesi (C1)

Koguma (C1)

Latch (C1)

Lee7 (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LolaVinca (C1)

LordLeafolot (C1)

LRRHood (C1)

Lukilu (C1)

Maby2021 (C1)

Mangeria (C1)

Matsumoto (C1)

McGee (C1)

McWolfish (C1)

Megamind (C1)

Melpomini (C1)

MikeLiesIn (C1)

Mikro (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Naval22 (C1)

NedWong (C1)

Ngannou (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pinkcreek (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

PurduePete (C1)

QBert (C1)

Quasimodo (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Ronan (C1)

Roots515 (C1)

Salacia (C1)

Sauce (C1)

ScottMcG (C1)

Sebata (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shifa (C1)

Shnickers (C1)

Shrimp (C1)

SilverDipper (C1)

SmallFry (C1)

Spec (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

SrishMeg2525 (C1)

StephanieG (C1)

Stubby (C1)

StubbySaigey (C1)

Tainan (C1)

Teardrop (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Trinitium (C1)

Turret (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yassified (C1)

YemiJoy2021 (C1)

YoungMoneyMata (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Greely (C2)

Myrna (C2)

Phabba (C2)

ScoobyDoobyDoo (C2)

Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesPinpoint plaques under normal conditions.
MorphotypeMyoviridae
Number of Genes230
Number of tRNAs35
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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Sebata_1

Sebata_2

Sebata_3
(nucleotidyltransferase)

Sebata_4

Sebata_5

Sebata_6

Sebata_7

Sebata_8

Sebata_9

Sebata_10

Sebata_11

Sebata_12

Sebata_13

Sebata_14

Sebata_15

Sebata_16

Sebata_17

Sebata_18

Sebata_19

Sebata_20

Sebata_21

Sebata_22

Sebata_23

Sebata_24

Sebata_25

Sebata_26

Sebata_27

Sebata_28

Sebata_29

Sebata_30

Sebata_31

Sebata_32

Sebata_33

Sebata_34

Sebata_35

Sebata_36

Sebata_37

Sebata_38

Sebata_39

Sebata_40

Sebata_41

Sebata_42

Sebata_43

Sebata_44

Sebata_45

Sebata_46

Sebata_47

Sebata_48

Sebata_49

Sebata_50

Sebata_51

Sebata_52

Sebata_53

Sebata_54

Sebata_55

Sebata_56

Sebata_57

Sebata_58

Sebata_59

Sebata_60

Sebata_61

Sebata_62

Sebata_63

Sebata_64

Sebata_65
(helix-turn-helix DNA binding domain protein)

Sebata_66

Sebata_67

Sebata_68

Sebata_69

Sebata_70

Sebata_71

Sebata_72

Sebata_73

Sebata_74

Sebata_75

Sebata_76

Sebata_77

Sebata_78

Sebata_79

Sebata_80

Sebata_81

Sebata_82

Sebata_83

Sebata_84 — tRNA
(tRNA-Ser (gct))

Sebata_85 — tRNA
(tRNA-Leu (cag))

Sebata_86 — tRNA
(tRNA-Leu (cag))

Sebata_87 — tRNA
(tRNA-Leu (gag))

Sebata_88 — tRNA
(tRNA-Leu (caa))

Sebata_89

Sebata_90

Sebata_91

Sebata_92

Sebata_93

Sebata_94
(ThyX-like thymidylate synthase)

Sebata_95

Sebata_96
(RNA ligase)

Sebata_97

Sebata_98

Sebata_99

Sebata_100

Sebata_101

Sebata_102

Sebata_103

Sebata_104

Sebata_105

Sebata_106

Sebata_107

Sebata_108

Sebata_109

Sebata_110

Sebata_111

Sebata_112

Sebata_113

Sebata_114

Sebata_115

Sebata_116

Sebata_117

Sebata_118

Sebata_119

Sebata_120

Sebata_121

Sebata_122

Sebata_123

Sebata_124

Sebata_125

Sebata_126

Sebata_127
(tail sheath protein)

Sebata_128

Sebata_129

Sebata_131
(tail assembly chaperone)

Sebata_130
(tail assembly chaperone)

Sebata_132
(tape measure protein)

Sebata_133

Sebata_134

Sebata_135

Sebata_136

Sebata_137

Sebata_138

Sebata_139

Sebata_140
(baseplate J protein)

Sebata_141

Sebata_142

Sebata_143

Sebata_144

Sebata_145
(minor tail protein)

Sebata_146

Sebata_147

Sebata_148

Sebata_149

Sebata_150

Sebata_151

Sebata_152

Sebata_153

Sebata_154 — tRNA
(tRNA-Pro (tgg))

Sebata_155 — tRNA
(tRNA-trp (cca))

Sebata_156 — tRNA
(tRNA-tyr (gta))

Sebata_157

Sebata_158
(peptidyl tRNA hydrolase)

Sebata_159 — tRNA
(tRNA-suppressor (cta))

Sebata_160 — tRNA
(tRNA-Met (cat))

Sebata_161 — tRNA
(tRNA-Cys (gca))

Sebata_162 — tRNA
(tRNA-Glu (ctc))

Sebata_163 — tRNA
(tRNA-His (gtg))

Sebata_164 — tRNA
(tRNA-Ala (tgc))

Sebata_165 — tRNA
(tRNA-Phe (gaa))

Sebata_166 — tRNA
(tRNA-Val (cac))

Sebata_167 — tRNA
(tRNA-Lys (ctt))

Sebata_168 — tRNA
(tRNA-Glu (ttc))

Sebata_169 — tRNA
(tRNA-Gly (tcc))

Sebata_170 — tRNA
(tRNA-Thr (cgt))

Sebata_171 — tRNA
(tRNA-Thr (tgt))

Sebata_172

Sebata_173 — tRNA
(tRNA-Thr (ggt))

Sebata_174

Sebata_175

Sebata_176 — tRNA
(tRNA-Gly (gcc))

Sebata_177 — tRNA
(tRNA-Asp (gtc))

Sebata_178 — tRNA
(tRNA-Met (cat))

Sebata_179 — tRNA
(tRNA-Ile (gat))

Sebata_180 — tRNA
(tRNA-Arg (acg))

Sebata_181 — tRNA
(tRNA-Val (gac))

Sebata_182 — tRNA
(tRNA-gly (tcc))

Sebata_183 — tRNA
(tRNA-Arg (cct))

Sebata_184 — tmRNA

Sebata_185 — tRNA
(tRNA-Gln (ttg))

Sebata_186 — tRNA
(tRNA-Arg (tct))

Sebata_187 — tRNA
(tRNA-lys (ttt))

Sebata_188

Sebata_189
(DNA helicase)

Sebata_190

Sebata_191

Sebata_192

Sebata_193

Sebata_194

Sebata_195

Sebata_196

Sebata_197

Sebata_198

Sebata_199

Sebata_200
(aminotransferase)

Sebata_201

Sebata_202

Sebata_203
(DnaC-like helicase loader)

Sebata_204
(DnaB-like dsDNA helicase)

Sebata_205

Sebata_206
(DNA primase)

Sebata_207

Sebata_208
(DnaJ-like chaperonin)

Sebata_209

Sebata_210
(DnaE-like DNA polymerase III)

Sebata_211
(RF-1 peptide chain release factor)

Sebata_212
(RecA-like DNA recombinase)

Sebata_213

Sebata_214

Sebata_215

Sebata_216
(RusA-like resolvase)

Sebata_217

Sebata_218

Sebata_219

Sebata_220

Sebata_221

Sebata_222

Sebata_223

Sebata_224

Sebata_225 — tRNA
(tRNA-Gln (ctg))

Sebata_226 — tRNA
(tRNA-Asn (gtt))

Sebata_227

Sebata_228

Sebata_229

Sebata_230

Sebata_231

Sebata_232

Sebata_233

Sebata_234

Sebata_235
(Ro-like RNA binding protein)

Sebata_236

Sebata_237

Sebata_238

Sebata_239

Sebata_240

Sebata_241
(glycosyltransferase)

Sebata_242

Sebata_243

Sebata_244
(PnuC-like nicotinamide riboside transporter)

Sebata_245

Sebata_246

Sebata_247

Sebata_248

Sebata_249

Sebata_250
(lysin A)

Sebata_251

Sebata_252
(lysin B)

Sebata_253

Sebata_254

Sebata_255

Sebata_256

Sebata_257

Sebata_258
(polynucleotide kinase)

Sebata_259

Sebata_260
(serine/threonine kinase)

Sebata_261

Sebata_262

Sebata_263
(PurA-like adenylosuccinate synthetase)

Sebata_264

Sebata_265

Sebata_266

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJN204348
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 3
Pitt Freezer Box Grid# H11
Available Files
Plaque PictureDownload
Virtual Digest PictureDownload
EM PictureDownload