Mycobacterium phage Shifa
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Detailed Information for Phage Shifa
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByShazia Mansoor
Year Found2018
Location FoundDurban, South Africa
Finding InstitutionUniversity of Kwazulu-Natal
ProgramMycobacterial Genetics Course, Durban, South Africa
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates29.866157 S, 30.981736 E Map
Discovery NotesThe soil sample was collected from the side of the entrance to F Block, University of KwaZulu-Natal, Westville.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 28, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage430
Genome length (bp)154859
Character of genome endsCircularly Permuted
GC Content64.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeMyoviridae
Number of Genes207
Number of tRNAs34
Number of tmRNAs1
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT889395
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload