| Detailed Information for Phage Shrimp |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Samantha Sorenson |
| Year Found | 2011 |
| Location Found | Bloomington, IL USA |
| Finding Institution | Illinois Wesleyan University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.489261 N, 88.991338 W Map |
| Discovery Notes | Temp=26° C
Soil type= dry
Environment=in the shade, under a tree
Depth of soil= 1in |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 31, 2012 |
| Approximate Shotgun Coverage | 300 |
| Genome length (bp) | 155714 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | turbid, comet-shaped plaques at 24 hours
no variation between my plaques
plaque diameter= less than 1mm |
| Morphotype | Myoviridae |
| Number of Genes | 235 |
| Number of tRNAs | 32 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KF024734 |
| Refseq Number | None yet |
| Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity |
| Archiving Info |
| Archiving status |
Archived |
| SEA Designator |
ILWEshrimpSS |
| SEA Lysate Titer |
3.62e8 |
| Date of SEA Lysate Titering |
Oct 11, 2011 |
| Pitt Freezer Box# |
24 |
| Pitt Freezer Box Grid# |
69 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
