| Detailed Information for Phage ValleyTerrace |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Marjorie Calle and Caleb Hughes |
| Year Found | 2017 |
| Location Found | Spring Valley , NY USA |
| Finding Institution | Rockland Community College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 41.127772 N, 74.088504 W Map |
| Discovery Notes | -Night time
-Cold
-Humid Weather
-Soil was collected after 5cm of digging
-Rained the night before
-Soil was enriched since it was a flowerbed |
| Naming Notes | We chose this name in regards to the party hall in which we collected the sample. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 26, 2018 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 820 |
| Genome length (bp) | 154553 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Rockland Community College |
| Annotation Status | In GenBank |
| Plaque Notes | Medium plaques with lysogenic behavior. |
| Morphotype | Myoviridae |
| Number of Genes | 233 |
| Number of tRNAs | 33 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK450432 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
67 |
| Pitt Freezer Box Grid# |
A1 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |
