Detailed Information for Phage Zalkecks |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Alex Stanley and Zack Rice |
Year Found | 2017 |
Location Found | West Lafayette, IN USA |
Finding Institution | Purdue University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 40.425096 N, 86.908015 W Map |
Discovery Notes | Outside of a local bagel shop near foot and car traffic in an urban setting. |
Naming Notes | The name for the phage is some combination of the 1st names of those who discovered it. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 26, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 66 |
Genome length (bp) | 154764 |
Character of genome ends | Circularly Permuted |
GC Content | 64.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | C |
Subcluster | C1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Purdue University |
Annotation Status | In GenBank |
Plaque Notes | cloudy round with smooth edges |
Morphotype | Myoviridae |
Number of Genes | 233 |
Number of tRNAs | 32 |
Number of tmRNAs | 1 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH825713 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
9.2E11 |
Pitt Freezer Box# |
60 |
Pitt Freezer Box Grid# |
C3 |
Available Files |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |