| Detailed Information for Phage Caravan |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | David Harris |
| Year Found | 2022 |
| Location Found | Blacksburg, VA USA |
| Finding Institution | Virginia Tech |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 37°C |
| GPS Coordinates | 37.21608 N, 80.41594 W Map |
| Discovery Notes | Found in a weedy area near a cleared field under ~2.5 cm of soil. |
| Naming Notes | Named after the jazz piece by Juan Tizol and Duke Ellington. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 4, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 322 |
| Genome length (bp) | 154789 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Virginia Tech |
| Annotation Status | In GenBank |
| Plaque Notes | Small, turbid plaques of varying sizes. |
| Morphotype | Myoviridae |
| Number of Genes | 224 |
| Number of tRNAs | 32 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OQ995436 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
153 |
| Pitt Freezer Box Grid# |
E9 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
