Detailed Information for Phage Darko |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Megan Majewski & Andrew Chichester |
Year Found | 2017 |
Location Found | Conway, SC USA |
Finding Institution | Coastal Carolina University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 33.8006 N, 79.0176 W Map |
Discovery Notes | Found near the dumpster behind Teal Residence Hall at 7:15 am. Clear warm morning. Soil was collected just below the surface. |
Naming Notes | Darko is the nickname of a friend |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 3, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1040 |
Genome length (bp) | 155951 |
Character of genome ends | Circularly Permuted |
GC Content | 64.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | C |
Subcluster | C1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Coastal Carolina University |
Annotation Status | In GenBank |
Plaque Notes | Very small, clear, and tight plaques |
Morphotype | Myoviridae |
Number of Genes | 232 |
Number of tRNAs | 33 |
Number of tmRNAs | 1 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK359361 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
62 |
Pitt Freezer Box Grid# |
B10 |
Available Files |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |