| Detailed Information for Phage Maby2021 |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Manuela Haddad Correa |
| Year Found | 2021 |
| Location Found | West Lafayette, IN United States |
| Finding Institution | Purdue University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.425869 N, 86.908066 W Map |
| Discovery Notes | I found the phage in the recently watered lawn of my sorority (Phi Mu) at Purdue University. I dug about 5 cm deep.
Abigail Kinkle, Joshua Grams and Ari Atlas also have helped characterized this phage. |
| Naming Notes | It is a combination of the discoverers name's Manu and Abby and the year it was discovered. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 10, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 170 |
| Genome length (bp) | 156908 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.7% |
| Sequencing Notes | The sequencing reads indicate that the sample was actually composed of two closely related C1 phages. The final sequence is the more common of the two, which was present in about 70% of the reads. |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Purdue University |
| Annotation Status | In GenBank |
| Morphotype | Myoviridae |
| Number of Genes | 235 |
| Number of tRNAs | 32 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OP068341 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
138 |
| Pitt Freezer Box Grid# |
C3 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
