Mycobacterium phage Byougenkin
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Detailed Information for Phage Byougenkin
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesByougakin
Found ByBrandon Aquino
Year Found2015
Location FoundMiami, FL United States
Finding InstitutionFlorida International University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates25.42 N, 80.17 W Map
Naming NotesRomanization of the Japanese word 病原菌「びょうげんきん」meaning: virus, germ, pathogen.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 7, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1746
Genome length (bp)54685
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGACGGCGC
GC Content61.4%
Sequencing Notesat position 18621 33% of reads have an A instead of consensus G
at position 18711 32% of reads have a G instead of consensus A
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

Renaud18 (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

BabytheFifth (F1)

Barson (F1)

Batiatus (F1)

BigPhil (F1)

BigPop (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

BoomCrackaPop (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

Buffalo (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clifton (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Estella (F1)

Extra (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Forneus (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GreatPumpkin (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Judylove (F1)

Kalikimaka (F1)

Katya (F1)

Kersh (F1)

KewGel (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

Latretium (F1)

LillyLatzon (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Lysinator (F1)

MacDrage (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

Mille (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Nemain (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

Noodle (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peanut21s (F1)

Phabio (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

Sandalphon (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StacysMom (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TonaldTDrump (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Viva (F1)

Wachhund (F1)

Wee (F1)

WheatBerry18 (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotation StatusIn GenBank
Plaque NotesFrom 3rd purification,
Small (around 1 mm diameter), clear plaques with cloudy circumference.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Byougenkin_1
(terminase, small subunit)

Byougenkin_2
(terminase, large subunit)

Byougenkin_3
(Portal Protein)

Byougenkin_4
(Capsid maturation protease)

Byougenkin_5
(scaffolding protein)

Byougenkin_6
(major capsid protein)

Byougenkin_7

Byougenkin_8

Byougenkin_9

Byougenkin_10

Byougenkin_11
(major tail subunit)

Byougenkin_12
(tail assembly chaperone)

Byougenkin_13
(tail assembly chaperone)

Byougenkin_14
(tape measure protein)

Byougenkin_15
(minor tail protein)

Byougenkin_16
(minor tail protein)

Byougenkin_17
(minor tail protein)

Byougenkin_18
(minor tail protein)

Byougenkin_19
(minor tail protein, D-ala D-ala carboxypeptidase domain)

Byougenkin_20
(minor tail protein)

Byougenkin_21

Byougenkin_22
(minor tail protein)

Byougenkin_23

Byougenkin_24

Byougenkin_25

Byougenkin_26

Byougenkin_27

Byougenkin_28

Byougenkin_29

Byougenkin_30
(lysin A)

Byougenkin_31
(lysin B)

Byougenkin_32
(holin)

Byougenkin_33

Byougenkin_34

Byougenkin_35
(DnaQ-like exonuclease)

Byougenkin_36

Byougenkin_37

Byougenkin_38

Byougenkin_39

Byougenkin_40
(integrase (Yint))

Byougenkin_41

Byougenkin_42
(immunity repressor)

Byougenkin_43

Byougenkin_44

Byougenkin_45

Byougenkin_46

Byougenkin_47

Byougenkin_48

Byougenkin_49

Byougenkin_50

Byougenkin_51

Byougenkin_52

Byougenkin_53

Byougenkin_54

Byougenkin_55

Byougenkin_56

Byougenkin_57

Byougenkin_58

Byougenkin_59

Byougenkin_60

Byougenkin_61

Byougenkin_62

Byougenkin_63
(HNH endonuclease protein)

Byougenkin_64

Byougenkin_65
(HNH endonuclease)

Byougenkin_66

Byougenkin_67

Byougenkin_68

Byougenkin_69

Byougenkin_70

Byougenkin_71

Byougenkin_72

Byougenkin_73

Byougenkin_74

Byougenkin_75

Byougenkin_76

Byougenkin_77

Byougenkin_78

Byougenkin_79

Byougenkin_80

Byougenkin_81

Byougenkin_82

Byougenkin_83

Byougenkin_84

Byougenkin_85

Byougenkin_86

Byougenkin_87

Byougenkin_88

Byougenkin_89

Byougenkin_90

Byougenkin_91

Byougenkin_92

Byougenkin_93

Byougenkin_94

Byougenkin_95

Byougenkin_96

Byougenkin_97
(galactosyltransferase)

Byougenkin_98

Byougenkin_99
(serine/threonine kinase)

Byougenkin_100
(glycosyltransferase)

Byougenkin_101
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH155866
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 26
Pitt Freezer Box Grid# F2
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload