Mycobacterium phage Zapner
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Detailed Information for Phage Zapner
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByZach Kramer
Year Found2013
Location FoundPittsburgh, PA United States of America
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.441208 N, 79.955017 W Map
Discovery NotesFound at the base of a tree in dry clumpy soil in Bouquet Gardens on the campus of The University of Pittsburgh.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 13, 2013
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage15980
Genome length (bp)55307
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCAGGGCAT
GC Content61.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF2
Other Cluster Members

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AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

Barson (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

BuzzLyseyear (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Emma (F1)

Empress (F1)

Estave1 (F1)

Estella (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

Judylove (F1)

Kalikimaka (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LillyLatzon (F1)

Llama (F1)

Llij (F1)

Lysinator (F1)

MacDrage (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Nemain (F1)

Nitzel (F1)

Noodle (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peanut21s (F1)

Phabio (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Polka14 (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spoonbill (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Wachhund (F1)

Wee (F1)

WheatBerry18 (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

Cornie (F5)

MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List

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Zapner_1
(HNH endonuclease)

Zapner_2
(HNH endonuclease)

Zapner_3
(terminase small subunit)

Zapner_4
(terminase large subunit)

Zapner_5
(portal protein)

Zapner_6
(capsid maturation protease)

Zapner_7
(scaffolding protein)

Zapner_8
(major capsid protein)

Zapner_9

Zapner_10

Zapner_11

Zapner_12

Zapner_13

Zapner_14

Zapner_15

Zapner_16
(tail assembly chaperone)

Zapner_17
(tail assembly chaperone)

Zapner_18
(tapemeasure protein)

Zapner_19
(minor tail protein)

Zapner_20
(minor tail protein)

Zapner_21
(minor tail protein)

Zapner_22
(minor tail protein)

Zapner_23
(minor tail protein)

Zapner_24
(minor tail protein)

Zapner_25
(minor tail protein)

Zapner_26
(D-ala-D-ala-carboxypeptidase)

Zapner_27
(minor tail protein)

Zapner_28

Zapner_29
(HNH homing endonuclease)

Zapner_30

Zapner_31

Zapner_32

Zapner_33

Zapner_34

Zapner_35

Zapner_36

Zapner_37
(lysin A)

Zapner_38
(lysin B)

Zapner_39
(holin)

Zapner_40

Zapner_41

Zapner_42

Zapner_43

Zapner_44

Zapner_45

Zapner_46

Zapner_47

Zapner_48

Zapner_49

Zapner_50

Zapner_51

Zapner_52

Zapner_53

Zapner_54

Zapner_55
(intergrase)

Zapner_56

Zapner_57
(immunity repressor)

Zapner_58
(CRO protein)

Zapner_59

Zapner_60

Zapner_61

Zapner_62
(excise)

Zapner_63

Zapner_64

Zapner_65

Zapner_66

Zapner_67

Zapner_68

Zapner_69

Zapner_70
(WhiB)

Zapner_71

Zapner_72
(WhiB)

Zapner_73
(HTH DNA binding protein)

Zapner_74

Zapner_75

Zapner_76

Zapner_77
(AAA-ATPase)

Zapner_78

Zapner_79
(HNH homing endonuclease)

Zapner_80

Zapner_81

Zapner_82
(GIY-YIG homing endonuclease)

Zapner_83

Zapner_84

Zapner_85

Zapner_86

Zapner_87

Zapner_88

Zapner_89

Zapner_90

Zapner_91

Zapner_92

Zapner_93

Zapner_94

Zapner_95

Zapner_96

Zapner_97

Zapner_98

Zapner_99

Zapner_100

Zapner_101

Zapner_102

Zapner_103

Zapner_104

Zapner_105
(AlpA-like transcriptional regulator)

Zapner_106
(glycosyltransferase/methyl transferase)

Zapner_107
(galactosyltransferase)

Zapner_108
(glycosyltransferase)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKJ567041
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload