Mycobacterium phage Hamulus
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Detailed Information for Phage Hamulus
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesLLCoolPhage
Found ByLauren Rodriguez
Year Found2008
Location FoundSanta Cruz, CA USA
Finding InstitutionUniversity of California, Santa Cruz
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates36.998917 N, 122.052767 W Map
Discovery NotesTaken from soil from a moist compost pile at Merrill College gardens at UCSC, 63°F.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 10, 2011
Approximate Shotgun Coverage135
Genome length (bp)57155
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGAAGGCGC
GC Content61.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

Renaud18 (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

BabytheFifth (F1)

Barson (F1)

Batiatus (F1)

BigPhil (F1)

BigPop (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

BoomCrackaPop (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

Buffalo (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clifton (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Estella (F1)

Extra (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Forneus (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GreatPumpkin (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Judylove (F1)

Kalikimaka (F1)

Katya (F1)

Kersh (F1)

KewGel (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

Latretium (F1)

LillyLatzon (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Lysinator (F1)

MacDrage (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

Mille (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Nemain (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

Noodle (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peanut21s (F1)

Phabio (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

Sandalphon (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StacysMom (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TonaldTDrump (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Viva (F1)

Wachhund (F1)

Wee (F1)

WheatBerry18 (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Hamulus_1
(terminase small subunit)

Hamulus_2
(terminase large subunit)

Hamulus_3
(portal protein)

Hamulus_4
(capsid maturation protease)

Hamulus_5
(scaffold protein)

Hamulus_6
(Capsid)

Hamulus_7

Hamulus_8

Hamulus_9

Hamulus_10

Hamulus_11
(major tail subunit)

Hamulus_12
(tail assembly chaperone)

Hamulus_13
(tail assembly chaperone)

Hamulus_14
(tape measure protein)

Hamulus_15
(minor tail subunit)

Hamulus_16
(minor tail subunit)

Hamulus_17

Hamulus_18
(minor tail subunit)

Hamulus_19
(D-ala-D-ala carboxypeptidase)

Hamulus_20

Hamulus_21

Hamulus_22

Hamulus_23

Hamulus_24

Hamulus_25
(HTH DNA-binding domain protein)

Hamulus_26

Hamulus_27

Hamulus_28

Hamulus_29

Hamulus_30
(LysA)

Hamulus_31
(HNH homing endonuclease domain protein)

Hamulus_32
(LysB)

Hamulus_33
(holin)

Hamulus_34

Hamulus_35

Hamulus_36
(DnaQ-like protein)

Hamulus_37

Hamulus_38

Hamulus_39

Hamulus_40
(HTH domain protein)

Hamulus_41

Hamulus_42

Hamulus_43
(integrase XerD)

Hamulus_44

Hamulus_45

Hamulus_46
(HTH domain protein)

Hamulus_47

Hamulus_48

Hamulus_49

Hamulus_50

Hamulus_51
(TOR inhibition protein)

Hamulus_52

Hamulus_53

Hamulus_54

Hamulus_55

Hamulus_56

Hamulus_57

Hamulus_58

Hamulus_59
(WhiB)

Hamulus_60
(HTH domain protein)

Hamulus_61
(TC3 transposase)

Hamulus_62

Hamulus_63

Hamulus_64
(DNA repair domain)

Hamulus_65
(HNH endonuclease)

Hamulus_66

Hamulus_67

Hamulus_68
(cytosine methyl transferase)

Hamulus_69
(DNA binding domain protein)

Hamulus_70

Hamulus_71

Hamulus_72

Hamulus_73
(modification methylase RSRI)

Hamulus_74

Hamulus_75

Hamulus_76

Hamulus_77

Hamulus_78

Hamulus_79

Hamulus_80

Hamulus_81

Hamulus_82

Hamulus_83

Hamulus_84

Hamulus_85

Hamulus_86

Hamulus_87

Hamulus_88

Hamulus_89
(ATP binding domain protein)

Hamulus_90

Hamulus_91

Hamulus_92

Hamulus_93

Hamulus_94

Hamulus_95
(DNA binding domain protein)

Hamulus_96

Hamulus_97

Hamulus_98
(trigger factor)

Hamulus_99

Hamulus_100

Hamulus_101
(polypeptide N-acetylglucos-aminyltransferase)

Hamulus_102
(Ser/Thr kinase)

Hamulus_103

Hamulus_104
(N-acetylglucos-aminyltransferase)

Hamulus_105
(HNH domain protein)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKF024723
Refseq NumberNC_022056
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
SEA Designator 2008UCSCLLCoolPhageLR
SEA Lysate Titer 2e11
Pitt Freezer Box# 6
Pitt Freezer Box Grid# 74
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload