Mycobacterium phage Sparkdehlily

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Detailed Information for Phage Sparkdehlily
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByNicholle Johnson
Year Found2014
Location FoundHarrisonburg, VA United States
Finding InstitutionJames Madison University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Discovery NotesI dug up a sample from outside the bioscience building.
Naming NotesNamed after my 3 dogs, Sparkely, Delilah, and Lily.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 9, 2015
Sequencing FacilityJames Madison University
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage200
Genome length (bp)56275
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGAAGGCGC
GC Content61.2%
Fasta file available?Available upon entering GPS coordinates
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

Renaud18 (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

BabytheFifth (F1)

Barson (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

BoomCrackaPop (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clifton (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Estella (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GreatPumpkin (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Judylove (F1)

Kalikimaka (F1)

Katya (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

Latretium (F1)

LillyLatzon (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Lysinator (F1)

MacDrage (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

MerrillCO18 (F1)

Mille (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Myosotis (F1)

Nemain (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

Noodle (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peanut21s (F1)

Phabio (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

Sandalphon (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

Taus (F1)

TDanisky (F1)

TonaldTDrump (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Wachhund (F1)

Wee (F1)

WheatBerry18 (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotation StatusIn GenBank
Plaque NotesMakes large clear plaques.
MorphotypeSiphoviridae
Number of Genes111
Has been Phamerated?Yes
Gene List

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Sparkdehlily_1
(terminase small subunit)

Sparkdehlily_2
(terminase large subunit)

Sparkdehlily_3
(portal protein)

Sparkdehlily_4
(capsid maturation protease)

Sparkdehlily_5
(scaffolding protein)

Sparkdehlily_6
(major capsid protein)

Sparkdehlily_7
(head-to-tail connector)

Sparkdehlily_8
(head-to-tail connector)

Sparkdehlily_9
(head-to-tail connector)

Sparkdehlily_10
(head-to-tail connector)

Sparkdehlily_11
(major tail subunit)

Sparkdehlily_12
(tail assembly chaperone)

Sparkdehlily_13
(tail assembly chaperone)

Sparkdehlily_14
(tape measure)

Sparkdehlily_15
(minor tail protein)

Sparkdehlily_16
(minor tail protein)

Sparkdehlily_17
(minor tail protein)

Sparkdehlily_18
(minor tail protein)

Sparkdehlily_19
(D-ala-D-ala carboxypeptidase)

Sparkdehlily_20
(minor tail protein)

Sparkdehlily_21

Sparkdehlily_22

Sparkdehlily_23
(minor tail protein)

Sparkdehlily_24
(minor tail protein)

Sparkdehlily_25
(HTH DNA binding protein)

Sparkdehlily_26

Sparkdehlily_27

Sparkdehlily_28

Sparkdehlily_29

Sparkdehlily_30
(lysin A)

Sparkdehlily_31
(lysin B)

Sparkdehlily_32
(holin)

Sparkdehlily_33

Sparkdehlily_34

Sparkdehlily_35
(DnaQ-like exonuclease)

Sparkdehlily_36

Sparkdehlily_37

Sparkdehlily_38

Sparkdehlily_39

Sparkdehlily_40

Sparkdehlily_41

Sparkdehlily_42

Sparkdehlily_43
(HTH DNA binding protein)

Sparkdehlily_44

Sparkdehlily_45
(integrase)

Sparkdehlily_46

Sparkdehlily_47

Sparkdehlily_48
(HTH DNA binding domain protein)

Sparkdehlily_49
(repessor)

Sparkdehlily_50
(antirepressor)

Sparkdehlily_51

Sparkdehlily_52

Sparkdehlily_53

Sparkdehlily_54
(excise)

Sparkdehlily_55

Sparkdehlily_56

Sparkdehlily_57

Sparkdehlily_58

Sparkdehlily_59

Sparkdehlily_60

Sparkdehlily_61

Sparkdehlily_62

Sparkdehlily_63

Sparkdehlily_64

Sparkdehlily_65
(WhiB)

Sparkdehlily_66

Sparkdehlily_67
(HTH DNA binding domain protein)

Sparkdehlily_68

Sparkdehlily_69

Sparkdehlily_70

Sparkdehlily_71

Sparkdehlily_72

Sparkdehlily_73

Sparkdehlily_74

Sparkdehlily_75

Sparkdehlily_76

Sparkdehlily_77

Sparkdehlily_78

Sparkdehlily_79

Sparkdehlily_80

Sparkdehlily_81

Sparkdehlily_82

Sparkdehlily_83

Sparkdehlily_84

Sparkdehlily_85

Sparkdehlily_86

Sparkdehlily_87

Sparkdehlily_88

Sparkdehlily_89

Sparkdehlily_90

Sparkdehlily_91

Sparkdehlily_92

Sparkdehlily_93

Sparkdehlily_94

Sparkdehlily_95

Sparkdehlily_96

Sparkdehlily_97

Sparkdehlily_98

Sparkdehlily_99

Sparkdehlily_100

Sparkdehlily_101
(GIY-YIG endonuclease)

Sparkdehlily_102

Sparkdehlily_103

Sparkdehlily_104

Sparkdehlily_105

Sparkdehlily_106

Sparkdehlily_107

Sparkdehlily_108
(glycosyltransferase)

Sparkdehlily_109

Sparkdehlily_110
(glycosyltransferase)

Sparkdehlily_111

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKT895280
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 15
Pitt Freezer Box Grid# A11
Available Files
Plaque PictureDownload