Mycobacterium phage Jabbawokkie
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Detailed Information for Phage Jabbawokkie
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByTyler Walburn
Year Found2012
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.440644 N, 79.958839 W Map
Discovery NotesFrom soil under a bush. It was at 8:30 p.m. Cloudy. Humid. 73 degree fahrenheit
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 15, 2013
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIon Torrent Sequencing
Approximate Shotgun Coverage570
Sanger Finishing Reactions7
Genome length (bp)55213
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCAGGGCAT
GC Content61.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF2
Other Cluster Members

Click to View

AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

Barson (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

BuzzLyseyear (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Emma (F1)

Empress (F1)

Estave1 (F1)

Estella (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

Judylove (F1)

Kalikimaka (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LillyLatzon (F1)

Llama (F1)

Llij (F1)

Lysinator (F1)

MacDrage (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Nemain (F1)

Nitzel (F1)

Noodle (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peanut21s (F1)

Phabio (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Polka14 (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spoonbill (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Wachhund (F1)

Wee (F1)

WheatBerry18 (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

Cornie (F5)

Plaque NotesVery small plaques
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List

Click to View

Jabbawokkie_1
(HNH homing endonuclease)

Jabbawokkie_2
(HNH homing endonuclease)

Jabbawokkie_3
(Terminase, small subunit)

Jabbawokkie_4
(Terminase, large subunit)

Jabbawokkie_5
(portal)

Jabbawokkie_6
(Capsid Maturation Protease)

Jabbawokkie_7
(Scaffolding)

Jabbawokkie_8
(Major Capsid Protein)

Jabbawokkie_9

Jabbawokkie_10

Jabbawokkie_11

Jabbawokkie_12

Jabbawokkie_13

Jabbawokkie_14

Jabbawokkie_15
(Major Tail Subunit)

Jabbawokkie_16
(Tail Assembly Chaperone)

Jabbawokkie_17
(Tail Assembly Chaperone)

Jabbawokkie_19
(Minor tail protein)

Jabbawokkie_20
(minor tail protein)

Jabbawokkie_21
(minor tail protein)

Jabbawokkie_22
(minor tail protein)

Jabbawokkie_23
(minor tail protein)

Jabbawokkie_24
(minor tail protein)

Jabbawokkie_25
(minor tail protein)

Jabbawokkie_26
(minor tail protein)

Jabbawokkie_27
(Minor tail protein, D-ala-D-ala carboxypeptidase)

Jabbawokkie_28
(Minor tail protein)

Jabbawokkie_29

Jabbawokkie_30
(HNH endonuclease domain)

Jabbawokkie_31
(DNA binding protein)

Jabbawokkie_32

Jabbawokkie_33

Jabbawokkie_34

Jabbawokkie_35

Jabbawokkie_36

Jabbawokkie_37

Jabbawokkie_38
(Lysin A)

Jabbawokkie_39
(Lysin B)

Jabbawokkie_40
(Holin)

Jabbawokkie_41

Jabbawokkie_42

Jabbawokkie_43

Jabbawokkie_44

Jabbawokkie_45

Jabbawokkie_46

Jabbawokkie_47

Jabbawokkie_48

Jabbawokkie_49

Jabbawokkie_50

Jabbawokkie_51

Jabbawokkie_52

Jabbawokkie_53

Jabbawokkie_55

Jabbawokkie_56

Jabbawokkie_57
(Integrase)

Jabbawokkie_58

Jabbawokkie_59
(Immunity Repressor)

Jabbawokkie_60
(CRO)

Jabbawokkie_61

Jabbawokkie_62

Jabbawokkie_63
(Xis)

Jabbawokkie_64

Jabbawokkie_65

Jabbawokkie_66

Jabbawokkie_67

Jabbawokkie_68

Jabbawokkie_69

Jabbawokkie_70

Jabbawokkie_71
(WhiB)

Jabbawokkie_72

Jabbawokkie_73
(WhiB)

Jabbawokkie_74

Jabbawokkie_75

Jabbawokkie_76

Jabbawokkie_77

Jabbawokkie_78
(AAA ATPase)

Jabbawokkie_79

Jabbawokkie_80
(HNH endonuclease)

Jabbawokkie_81

Jabbawokkie_82

Jabbawokkie_83
(GIY-YIG endonuclease)

Jabbawokkie_84

Jabbawokkie_85

Jabbawokkie_86

Jabbawokkie_87

Jabbawokkie_88

Jabbawokkie_89

Jabbawokkie_90

Jabbawokkie_91

Jabbawokkie_92

Jabbawokkie_93

Jabbawokkie_94

Jabbawokkie_95

Jabbawokkie_96

Jabbawokkie_97

Jabbawokkie_98

Jabbawokkie_99

Jabbawokkie_100

Jabbawokkie_101

Jabbawokkie_102

Jabbawokkie_103

Jabbawokkie_104

Jabbawokkie_105
(transcriptional regulator, AlpA-like)

Jabbawokkie_106
(glycosyltransferase/methyl transferase)

Jabbawokkie_107
(Galactosyltransferase)

Jabbawokkie_108
(Glycosyltransferase)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKF017003
Refseq NumberNC_022069
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
EM PictureDownload