Mycobacterium phage Quico
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Quico
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesB2
Found ByJames Daltro Lima Jr
Year Found2011
Location FoundSao Paulo, Brazil
Finding InstitutionUniversidade Federal de Sao Paulo
ProgramUnavailable
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates23.651246 S, 46.620748 W Map
Discovery Notesisolated from a compost production cell in the Sao Paulo Zoo (Fundação Parque Zoológico de São Paulo)
Naming Notesthe set of characters of the Mexican television sitcom "El Chavo del ocho" that has been broadcast by a Brazilian TV Network since 1984
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 23, 2014
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage507
Genome length (bp)58671
Character of genome ends3' Sticky Overhang
Overhang Length10 bp
Overhang SequenceCCGAAGGCAT
GC Content61.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Other Cluster Members

Click to View

AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

BuzzLyseyear (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Emma (F1)

Empress (F1)

Estave1 (F1)

Estella (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

Judylove (F1)

Kalikimaka (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LillyLatzon (F1)

Llama (F1)

Llij (F1)

Lysinator (F1)

MacDrage (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Nemain (F1)

Nitzel (F1)

Noodle (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phabio (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Polka14 (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spoonbill (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

Cornie (F5)

MorphotypeSiphoviridae
Final annotation complete?No
Number of Genes98
Has been Phamerated?Yes
Gene List

Click to View

Quico_1
(HNH endonuclease domain protein)

Quico_2

Quico_3
(terminase large subunit)

Quico_4
(portal protein)

Quico_5
(head maturation protease)

Quico_6
(scaffolding protein)

Quico_7
(capsid protein)

Quico_8

Quico_9

Quico_10

Quico_11

Quico_12

Quico_13
(tail assembly chaperone)

Quico_14
(tail assembly chaperone)

Quico_15
(tapemeasure)

Quico_16
(minor tail protein)

Quico_17
(minor tail protein)

Quico_18
(minor tail protein)

Quico_19
(minor tail protein)

Quico_20
(minor tail protein)

Quico_21
(minor tail protein)

Quico_22

Quico_23

Quico_24

Quico_25

Quico_26

Quico_27

Quico_28

Quico_29

Quico_30

Quico_31
(lysin A)

Quico_32
(lysin B)

Quico_33
(holin)

Quico_34

Quico_35

Quico_36

Quico_37

Quico_38

Quico_39

Quico_40

Quico_41

Quico_42

Quico_43

Quico_44

Quico_45

Quico_46
(HTH binding domain)

Quico_47

Quico_48

Quico_49

Quico_50
(integrase)

Quico_51

Quico_52
(immunity repressor)

Quico_53

Quico_54
(HTH DNA-binding domain protein)

Quico_55
(antirepressor)

Quico_56

Quico_57

Quico_58

Quico_59
(Xis domain protein)

Quico_60

Quico_61

Quico_62

Quico_63

Quico_64

Quico_65

Quico_66
(WhiB)

Quico_67

Quico_68
(HTH DNA-binding domain protein)

Quico_69

Quico_70

Quico_71

Quico_72

Quico_73
(HNH endonuclease domain protein)

Quico_74

Quico_75

Quico_76

Quico_77
(DNA methylase)

Quico_78
(DNA binding domain)

Quico_79

Quico_80

Quico_81

Quico_82
(DNA methylase)

Quico_83

Quico_84

Quico_85

Quico_86

Quico_87

Quico_88

Quico_89

Quico_90

Quico_91

Quico_92

Quico_93

Quico_94

Quico_95

Quico_96

Quico_97

Quico_98

Quico_99

Quico_100

Quico_101

Quico_102

Quico_103
(HTH DNA-binding domain protein)

Quico_104

Quico_105

Quico_106

Quico_107

Quico_108

Quico_109

Quico_110
(glycosyltransferase domain protein)

Quico_111

Quico_112
(glycosyltransferase domain protein)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKR997968
Refseq NumberNone yet