Mycobacterium phage PopTart
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Detailed Information for Phage PopTart
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByShalom Govender
Year Found2012
Location FoundHazelwood, Pretoria, South Africa
Finding InstitutionUniversity of Kwazulu-Natal
ProgramMycobacterial Genetics Course, Durban, South Africa
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates25.776116 S, 28.259695 E Map
Discovery NotesFound from soil taken from Hazelwood in Durban south Africa.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 28, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3283
Genome length (bp)55094
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGAAGGCGC
GC Content61.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Other Cluster Members

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AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

Renaud18 (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

Barson (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

BuzzLyseyear (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Estave1 (F1)

Estella (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

Judylove (F1)

Kalikimaka (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LillyLatzon (F1)

Llama (F1)

Llij (F1)

Lysinator (F1)

MacDrage (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Nemain (F1)

Nitzel (F1)

Noodle (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peanut21s (F1)

Phabio (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Polka14 (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Wachhund (F1)

Wee (F1)

WheatBerry18 (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

Cornie (F5)

MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes95
Has been Phamerated?Yes
Gene List

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PopTart_1
(Terminase, small subunit)

PopTart_2
(Terminase, large subunit)

PopTart_3
(Portal)

PopTart_4
(Capsid maturation protease)

PopTart_5
(Scaffolding)

PopTart_6
(Major Capsid)

PopTart_7
(head-to-tail connector)

PopTart_8
(head-to-tail connector)

PopTart_9
(head-to-tail connector)

PopTart_10
(head-to-tail connector)

PopTart_11
(Major tail)

PopTart_12
(Tail Assembly Chaperone)

PopTart_13
(Tail Assembly Chaperone)

PopTart_14
(Tape measure)

PopTart_15
(Minor Tail)

PopTart_16
(Minor tail)

PopTart_17
(Minor tail)

PopTart_18
(Minor tail)

PopTart_19
(Minor tail, D-ala-D-ala decarboxylase)

PopTart_20
(Minor Tail)

PopTart_21
(Minor tail)

PopTart_22
(Minor Tail)

PopTart_23
(Minor Tail)

PopTart_24
(Minor tail)

PopTart_25
(Helix-turn-Helix DNA binding domain)

PopTart_26

PopTart_27

PopTart_28

PopTart_29

PopTart_30
(Lysin A)

PopTart_31
(Lysin B)

PopTart_32
(Holin)

PopTart_33

PopTart_34

PopTart_35
(DnaQ-like exonuclease)

PopTart_36

PopTart_37

PopTart_38

PopTart_39
(Integrase (Y-Int))

PopTart_40

PopTart_41
(Immunity Repressor)

PopTart_42
(CRO)

PopTart_43
(Antirepressor)

PopTart_44

PopTart_45

PopTart_46

PopTart_47

PopTart_48

PopTart_49

PopTart_50

PopTart_51

PopTart_52
(WhiB family transcription factor)

PopTart_53

PopTart_54
(HTH DNA binding domain)

PopTart_55

PopTart_56

PopTart_57

PopTart_58

PopTart_59

PopTart_60
(DNA methylase)

PopTart_61

PopTart_62

PopTart_63
(DNA methylase)

PopTart_64

PopTart_65

PopTart_66

PopTart_67

PopTart_68

PopTart_69

PopTart_70

PopTart_71

PopTart_72

PopTart_73

PopTart_74

PopTart_75

PopTart_76

PopTart_77

PopTart_78

PopTart_79

PopTart_80

PopTart_81

PopTart_82

PopTart_83

PopTart_84
(GIY-YIG DNA binding wndonuclease)

PopTart_85

PopTart_86

PopTart_87

PopTart_88

PopTart_89

PopTart_90

PopTart_91
(glycosyltransferase)

PopTart_92

PopTart_93

PopTart_94
(glycosyltransferase)

PopTart_95
(HNH endonuclease)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKT281792
Refseq NumberNone yet
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload