Mycobacterium phage Cabrinians
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Detailed Information for Phage Cabrinians
Discovery Information
Isolation HostMycobacterium phlei str.
Found ByMother Cabrini High School Students
Year Found2012
Location FoundManhattan, New York City, NY USA
Finding InstitutionCabrini University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates40.857999 N, 73.93562 W Map
Discovery NotesMycobacteriophage was found by Mother Cabrini High School students who participated in a 2012 Summer Research Camp at Cabrini College. Soil samples from all students were combined and enriched. Cabrinians was isolated using Mycobacterium phlei. It can infect Mycobacterium smegmatis.
Naming NotesNamed after Cabrini high school and Cabrini College.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 13, 2013
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIon Torrent Sequencing
Approximate Shotgun Coverage560
Sanger Finishing Reactions10
Genome length (bp)56669
Character of genome ends3' Sticky Overhang
Overhang Length10 bp
Overhang SequenceCGGACGGCGC
GC Content61.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Other Cluster Members

Click to View

AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

BuzzLyseyear (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Emma (F1)

Empress (F1)

Estave1 (F1)

Estella (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

Judylove (F1)

Kalikimaka (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LillyLatzon (F1)

Llama (F1)

Llij (F1)

Lysinator (F1)

MacDrage (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Nemain (F1)

Nitzel (F1)

Noodle (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phabio (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Polka14 (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spoonbill (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

Cornie (F5)

MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes101
Has been Phamerated?Yes
Gene List

Click to View

Cabrinians_1
(Terminase, Small Subunit)

Cabrinians_2
(Terminase, Large Subunit)

Cabrinians_3
(Portal)

Cabrinians_4
(Capsid Maturation Protease)

Cabrinians_5
(Scaffolding)

Cabrinians_6
(Major Capsid)

Cabrinians_7
(Head-to-tail connector)

Cabrinians_8
(Head-to-tail connector)

Cabrinians_9
(Head-to-tail connector)

Cabrinians_10
(Head-to-tail connector)

Cabrinians_11
(Major tail subunit)

Cabrinians_12
(Tail assembly chaperone)

Cabrinians_13
(Tail assembly chaperone)

Cabrinians_14
(Tape measure)

Cabrinians_15
(Minor tail)

Cabrinians_16
(Minor tail)

Cabrinians_17
(Minor tail)

Cabrinians_18
(Minor tail)

Cabrinians_19
(Minor tail, D-ala-D-ala carboxypeptidase)

Cabrinians_20
(Minor tail)

Cabrinians_21
(Minor tail)

Cabrinians_22

Cabrinians_23
(Minor tail)

Cabrinians_24
(Minor tail)

Cabrinians_25
(HTH DNA binding protein)

Cabrinians_26

Cabrinians_27

Cabrinians_28

Cabrinians_29

Cabrinians_30
(Lysin A)

Cabrinians_31
(Lysin B)

Cabrinians_32
(Holin)

Cabrinians_33

Cabrinians_34

Cabrinians_35
(DNA Q-like exonuclease)

Cabrinians_36

Cabrinians_37

Cabrinians_38

Cabrinians_39

Cabrinians_40

Cabrinians_41

Cabrinians_42
(Transposase)

Cabrinians_43

Cabrinians_44

Cabrinians_45
(Integrase)

Cabrinians_46

Cabrinians_47
(XRE family transcriptional regulator)

Cabrinians_48
(Transcriptional repressor)

Cabrinians_49

Cabrinians_50

Cabrinians_51
(Xis)

Cabrinians_52

Cabrinians_53

Cabrinians_54

Cabrinians_55

Cabrinians_56

Cabrinians_57

Cabrinians_58
(WhiB)

Cabrinians_59

Cabrinians_60
(WhiB)

Cabrinians_61
(Helix-Turn-Helix DNA Binding)

Cabrinians_62

Cabrinians_63

Cabrinians_64

Cabrinians_65
(RecA)

Cabrinians_66
(HNH endonuclease)

Cabrinians_67
(Helicase)

Cabrinians_68
(DNA methylase)

Cabrinians_69

Cabrinians_70

Cabrinians_71

Cabrinians_72
(GIY-YIG nuclease)

Cabrinians_73

Cabrinians_74

Cabrinians_75

Cabrinians_76

Cabrinians_77

Cabrinians_78

Cabrinians_79

Cabrinians_80

Cabrinians_81

Cabrinians_82

Cabrinians_83

Cabrinians_84

Cabrinians_85

Cabrinians_86

Cabrinians_87

Cabrinians_88
(GIY-YIG Endonuclease)

Cabrinians_89

Cabrinians_90

Cabrinians_91

Cabrinians_92

Cabrinians_93

Cabrinians_94

Cabrinians_95

Cabrinians_96

Cabrinians_97

Cabrinians_98

Cabrinians_99
(Glycosyltransferase)

Cabrinians_100
(Glycosyltransferase)

Cabrinians_101
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKT895281
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
EM PictureDownload