Mycobacterium phage Job42
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Detailed Information for Phage Job42
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJames O'Brien
Year Found2011
Location FoundProvidence, RI USA
Finding InstitutionProvidence College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.843333 N, 71.437777 W Map
Discovery NotesMoist, fertile soil. Found on a rainy day at 65° F.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 17, 2012
Approximate Shotgun Coverage210
Genome length (bp)59626
Character of genome ends3' Sticky Overhang
Overhang Length10 bp
Overhang SequenceCCGACGGCAT
GC Content61.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Other Cluster Members

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AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

BuzzLyseyear (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Emma (F1)

Empress (F1)

Estave1 (F1)

Estella (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

Judylove (F1)

Kalikimaka (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LillyLatzon (F1)

Llama (F1)

Llij (F1)

Lysinator (F1)

MacDrage (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Nemain (F1)

Nitzel (F1)

Noodle (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phabio (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Polka14 (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spoonbill (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

Cornie (F5)

Plaque NotesComet plaque. Small clear plaque surrounded by a larger opaque plaque.
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes106
Has been Phamerated?Yes
Gene List

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Job42_1
(HNH endonuclease)

Job42_2

Job42_3
(terminase)

Job42_4
(portal)

Job42_5
(capsid maturation protease)

Job42_6
(scaffolding)

Job42_7
(major capsid protein)

Job42_8

Job42_9

Job42_10

Job42_11

Job42_12
(major tail subunit)

Job42_13
(tail assembly chaperone)

Job42_14
(tail assembly chaperone)

Job42_15
(HNH endonuclease)

Job42_16
(tapemeasure)

Job42_17
(transposase)

Job42_18
(minor tail protein)

Job42_19
(minor tail protein)

Job42_20
(minor tail protein)

Job42_21
(minor tail protein)

Job42_22
(D-ala-D-ala carboxypeptidase)

Job42_23
(minor tail protien)

Job42_24

Job42_25

Job42_26

Job42_27

Job42_28

Job42_29

Job42_30

Job42_31

Job42_32

Job42_33

Job42_34
(Lysin A)

Job42_35
(Lysin B)

Job42_36
(holin)

Job42_37

Job42_38

Job42_39
(DnaQ-like)

Job42_40

Job42_41

Job42_43

Job42_44
(DNA binding domain (Xis?))

Job42_45
(integrase, (Y-int))

Job42_46

Job42_47
(immunity repressor)

Job42_48
(HTH DNA binding domain (Cro))

Job42_49
(Antirepressor)

Job42_50

Job42_51

Job42_52

Job42_53

Job42_54

Job42_55

Job42_56

Job42_57

Job42_58

Job42_59

Job42_60
(WhiB)

Job42_61

Job42_62
(WhiB)

Job42_63
(HTH DNA binding protein)

Job42_64

Job42_65

Job42_66

Job42_67

Job42_68

Job42_69
(HNH endonuclease domain)

Job42_70
(DNA methylase)

Job42_71

Job42_72

Job42_73

Job42_74

Job42_75

Job42_76

Job42_77

Job42_HYPOTHETICAL PROTEIN

Job42_78

Job42_79

Job42_80

Job42_81

Job42_82

Job42_83

Job42_84

Job42_85

Job42_86

Job42_87

Job42_88

Job42_89

Job42_90

Job42_91

Job42_92

Job42_93
(GIY-YIG endonuclease)

Job42_94

Job42_95

Job42_96

Job42_97

Job42_98

Job42_99

Job42_100

Job42_101

Job42_102

Job42_103
(Glycosyltransferase)

Job42_104

Job42_105

Job42_106
(Glycosyltransferase)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKC661280
Refseq NumberNC_021538
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE