Mycobacterium phage OldBen
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Detailed Information for Phage OldBen
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByLuke Keller
Year Found2016
Location FoundBismarck, ND United States
Finding InstitutionUniversity of Mary
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates46.4338 N, 100.4507 W Map
Discovery NotesThe Soil sample was collected on 9-26-16 the ambient temperature was 61 degrees fahrenheit.The sample was found under some mulch near new athletic complex.
Naming NotesI was unable to find any phage throughout this course. Finally, I labeled one plate as "the final hope". Obiwan Kenobe was the final hope of the republic just as old ben was the final hope for the class.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 4, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1805
Genome length (bp)57159
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGACGGCGC
GC Content61.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

Renaud18 (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

BabytheFifth (F1)

Barson (F1)

Batiatus (F1)

BigPhil (F1)

BigPop (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

BoomCrackaPop (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

Buffalo (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clifton (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Estella (F1)

Extra (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Forneus (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GreatPumpkin (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Judylove (F1)

Kalikimaka (F1)

Katya (F1)

Kersh (F1)

KewGel (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

Latretium (F1)

LillyLatzon (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Lysinator (F1)

MacDrage (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

Mille (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Nemain (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

Noodle (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peanut21s (F1)

Phabio (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

Sandalphon (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StacysMom (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TonaldTDrump (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Viva (F1)

Wachhund (F1)

Wee (F1)

WheatBerry18 (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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OldBen_1
(terminase small subunit)

OldBen_2
(terminase large subunit)

OldBen_3
(portal protein)

OldBen_4
(capsid maturation protease)

OldBen_5
(scaffolding protein)

OldBen_6
(major capsid protein)

OldBen_7
(head-to-tail connector complex protein)

OldBen_8
(head-to-tail connector complex protein)

OldBen_9

OldBen_10
(head-to-tail connector complex protein)

OldBen_11
(major tail subunit)

OldBen_12
(tail assembly chaperone)

OldBen_13
(tail assembly chaperone)

OldBen_14
(tape measure protein)

OldBen_15
(minor tail protein)

OldBen_16
(minor tail protein)

OldBen_17
(minor tail protein)

OldBen_18
(minor tail protein)

OldBen_19
(minor tail protein)

OldBen_20
(minor tail protein)

OldBen_21
(minor tail protein)

OldBen_22
(minor tail protein)

OldBen_23
(minor tail protein)

OldBen_24
(minor tail protein)

OldBen_25
(HTH DNA-binding domain protein)

OldBen_26

OldBen_27

OldBen_28

OldBen_29

OldBen_30
(lysin A)

OldBen_31
(lysin B)

OldBen_32
(holin)

OldBen_33

OldBen_34

OldBen_35
(DnaQ-like exonuclease)

OldBen_36

OldBen_37

OldBen_38

OldBen_39

OldBen_40

OldBen_41
(integrase)

OldBen_42

OldBen_43
(immunity repressor)

OldBen_44

OldBen_45

OldBen_46

OldBen_47

OldBen_48
(HTH protein)

OldBen_49

OldBen_50

OldBen_51

OldBen_52

OldBen_53

OldBen_54
(WhiB family transcription factor)

OldBen_55

OldBen_56

OldBen_57
(HTH DNA-binding protein)

OldBen_58

OldBen_59

OldBen_60

OldBen_61
(DNA recombinase)

OldBen_62

OldBen_63
(HNH endonuclease)

OldBen_64

OldBen_65

OldBen_66

OldBen_67

OldBen_68
(methylase)

OldBen_69

OldBen_70

OldBen_71
(DNA methylase)

OldBen_72

OldBen_73

OldBen_74

OldBen_75

OldBen_76

OldBen_77

OldBen_78

OldBen_79

OldBen_80

OldBen_81

OldBen_82

OldBen_83

OldBen_84

OldBen_85

OldBen_86

OldBen_87

OldBen_88

OldBen_89

OldBen_90

OldBen_91
(HTH DNA-binding domain protein)

OldBen_92

OldBen_93

OldBen_94

OldBen_95

OldBen_96

OldBen_97

OldBen_98
(galactosyltransferase)

OldBen_99

OldBen_100
(glycosyltransferase)

OldBen_101
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMG770213
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 40
Pitt Freezer Box Grid# A8
Available Files
GenBank File for PhameratorDownload