Mycobacterium phage UncleRicky
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Detailed Information for Phage UncleRicky
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByLexi Marx
Year Found2016
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.49153 N, 80.034324 W Map
Discovery NotesThe soil was moist from dew in the early morning. The sample was taken near bird feeder on the edge of the woods.
Naming NotesThe name of my Uncle who got me this position.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 12, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2777
Genome length (bp)57256
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCCGATGGCAT
GC Content61.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

Renaud18 (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

BabytheFifth (F1)

Barson (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

BoomCrackaPop (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clifton (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Estella (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GreatPumpkin (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Judylove (F1)

Kalikimaka (F1)

Katya (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

Latretium (F1)

LillyLatzon (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Lysinator (F1)

MacDrage (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

MerrillCO18 (F1)

Mille (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Myosotis (F1)

Nemain (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

Noodle (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peanut21s (F1)

Phabio (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

Sandalphon (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

Taus (F1)

TDanisky (F1)

TonaldTDrump (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Wachhund (F1)

Wee (F1)

WheatBerry18 (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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UncleRicky_1
(HNH endonuclease)

UncleRicky_2
(terminase small subunit)

UncleRicky_3
(terminase large subunit)

UncleRicky_4
(portal protein)

UncleRicky_5
(capsid maturation protease)

UncleRicky_6
(scaffolding protein)

UncleRicky_7
(major capsid protein)

UncleRicky_8

UncleRicky_9

UncleRicky_10

UncleRicky_11
(head-to-tail connector complex protein)

UncleRicky_12
(major tail protein)

UncleRicky_13
(tail assembly chaperone)

UncleRicky_14
(tail assembly chaperone)

UncleRicky_15
(tape measure protein)

UncleRicky_16
(minor tail protein)

UncleRicky_17
(minor tail protein)

UncleRicky_18
(minor tail protein)

UncleRicky_19
(minor tail protein)

UncleRicky_20
(minor tail protein)

UncleRicky_21

UncleRicky_22
(transposase)

UncleRicky_23

UncleRicky_24

UncleRicky_25

UncleRicky_26

UncleRicky_27

UncleRicky_28

UncleRicky_29

UncleRicky_30

UncleRicky_31

UncleRicky_32

UncleRicky_33
(lysin A)

UncleRicky_34
(lysin B)

UncleRicky_35
(holin)

UncleRicky_36

UncleRicky_37

UncleRicky_38
(exonuclease)

UncleRicky_39

UncleRicky_40

UncleRicky_41

UncleRicky_42

UncleRicky_43
(integrase)

UncleRicky_44

UncleRicky_45

UncleRicky_46
(Cro protein)

UncleRicky_47
(antirepressor)

UncleRicky_48

UncleRicky_49

UncleRicky_50
(excise)

UncleRicky_51

UncleRicky_52

UncleRicky_53

UncleRicky_54

UncleRicky_55

UncleRicky_56
(WhiB family transcription factor)

UncleRicky_57

UncleRicky_58
(WhiB family transcription factor)

UncleRicky_59
(helix-turn-helix DNA binding protein)

UncleRicky_60

UncleRicky_61

UncleRicky_62

UncleRicky_63

UncleRicky_64
(HNH endonuclease)

UncleRicky_65

UncleRicky_66

UncleRicky_67

UncleRicky_68

UncleRicky_69
(PAPS reductase-like domain protein)

UncleRicky_70

UncleRicky_71
(G-I-Y-Y-I-G endonuclease)

UncleRicky_72

UncleRicky_73

UncleRicky_74

UncleRicky_75

UncleRicky_76

UncleRicky_77

UncleRicky_78

UncleRicky_79

UncleRicky_80

UncleRicky_81

UncleRicky_82
(MPME1 protein)

UncleRicky_83

UncleRicky_84

UncleRicky_85

UncleRicky_86

UncleRicky_87

UncleRicky_88

UncleRicky_89

UncleRicky_90

UncleRicky_91

UncleRicky_92

UncleRicky_93

UncleRicky_94

UncleRicky_95

UncleRicky_96

UncleRicky_97

UncleRicky_98

UncleRicky_99

UncleRicky_100
(glycosyltransferase)

UncleRicky_101

UncleRicky_102

UncleRicky_103
(transposase)

UncleRicky_104
(transposase)

UncleRicky_105
(glycosyltransferase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH001448
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 5
Pitt Freezer Box Grid# G3
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload