Recently Added Phages

Bailey Neptune Chatty Raccoon Honk

Recently Modified Phages

Gideon Silvafighter Gage YungJamal Zulu

Recently Finished Phages

BayC (BG) Nesbitt (BL) Azathoth (AN) Copper (AN) Sibs6 (A1)
Mycobacterium phage Dorothy
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Dorothy
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByRia Halder
Year Found2011
Location FoundLeawood, KS USA
Finding InstitutionBaylor University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Discovery NotesLocation-Vegetable garden in Leawood, KS
Depth-five inches below ground
Environment-Moist due to rainy weather
Temperature-86 degrees Fahrenheit.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 28, 2012
Sequencing FacilityVirginia Commonwealth University Nucleic Acids Research Facilities
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage78
Genome length (bp)58866
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGACGGCGC
GC Content61.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Other Cluster Members

Click to View

AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

Barson (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

BuzzLyseyear (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Emma (F1)

Empress (F1)

Estave1 (F1)

Estella (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

Judylove (F1)

Kalikimaka (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LillyLatzon (F1)

Llama (F1)

Llij (F1)

Lysinator (F1)

MacDrage (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Nemain (F1)

Nitzel (F1)

Noodle (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peanut21s (F1)

Phabio (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Polka14 (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spoonbill (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Wachhund (F1)

Wee (F1)

WheatBerry18 (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

Cornie (F5)

Plaque NotesPlaques appear clear, non-turbid, and vary only in size.
MorphotypeSiphoviridae
Final annotation complete?Yes
Has been Phamerated?Yes
Gene List

Click to View

Dorothy_1
(terminase, small subunit)

Dorothy_2
(terminase, large subunit)

Dorothy_3
(portal)

Dorothy_4
(capsid maturation protease)

Dorothy_5
(scaffolding)

Dorothy_6
(major capsid)

Dorothy_7

Dorothy_8

Dorothy_9

Dorothy_10

Dorothy_11
(major tail subunit)

Dorothy_12
(tail assembly chaperone)

Dorothy_13
(tail assembly chaperone)

Dorothy_14
(tapemeasure)

Dorothy_15
(minor tail)

Dorothy_16
(minor tail)

Dorothy_17
(minor tail)

Dorothy_18
(minor tail)

Dorothy_19
(D-ala-D-ala carboxypeptidase)

Dorothy_20

Dorothy_21

Dorothy_22

Dorothy_23

Dorothy_24

Dorothy_25

Dorothy_26

Dorothy_27

Dorothy_28

Dorothy_29

Dorothy_30
(Lysin A)

Dorothy_31
(Lysin B)

Dorothy_32
(Holin)

Dorothy_33

Dorothy_34

Dorothy_35
(DnaQ-like)

Dorothy_36

Dorothy_37

Dorothy_38

Dorothy_39

Dorothy_40
(integrase, Y-int)

Dorothy_41

Dorothy_42
(immunity repressor)

Dorothy_43
(HTH DNA binding (Cro))

Dorothy_44
(antirepressor)

Dorothy_45

Dorothy_46

Dorothy_47

Dorothy_48

Dorothy_49

Dorothy_50

Dorothy_51

Dorothy_52

Dorothy_53

Dorothy_54

Dorothy_55
(WhiB)

Dorothy_56

Dorothy_57
(WhiB)

Dorothy_58
(HTH DNA binding)

Dorothy_59

Dorothy_60

Dorothy_61

Dorothy_62

Dorothy_63

Dorothy_64
(HNH endonuclease)

Dorothy_65

Dorothy_66

Dorothy_67

Dorothy_68

Dorothy_69

Dorothy_70

Dorothy_71
(DNA methylase)

Dorothy_72

Dorothy_73

Dorothy_74

Dorothy_75
(DNA methylase)

Dorothy_76
(DNA methylase)

Dorothy_77

Dorothy_78

Dorothy_79

Dorothy_80

Dorothy_81

Dorothy_82

Dorothy_83

Dorothy_84

Dorothy_85

Dorothy_86

Dorothy_87

Dorothy_88

Dorothy_89

Dorothy_90

Dorothy_91

Dorothy_92

Dorothy_93

Dorothy_94

Dorothy_95
(HTH DNA binding domain)

Dorothy_96

Dorothy_97

Dorothy_98

Dorothy_99

Dorothy_100

Dorothy_101

Dorothy_102
(glycosyl transferase)

Dorothy_103

Dorothy_104
(glycosyl transferase)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJX411620
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload