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BayC (BG) Nesbitt (BL) Azathoth (AN) Copper (AN) Sibs6 (A1)
Mycobacterium phage Che9d
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Detailed Information for Phage Che9d
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByV. Kumar
Year Found2002
Location FoundChennai, India
Finding InstitutionAlbert Einstein College of Medicine
ProgramUnavailable
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates13.073124 N, 80.249612 E Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 5, 2002
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodSanger Sequencing
Genome length (bp)56275
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
GC Content60.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF2
Other Cluster Members

Click to View

AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

Barson (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

BuzzLyseyear (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Emma (F1)

Empress (F1)

Estave1 (F1)

Estella (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

Judylove (F1)

Kalikimaka (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LillyLatzon (F1)

Llama (F1)

Llij (F1)

Lysinator (F1)

MacDrage (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Nemain (F1)

Nitzel (F1)

Noodle (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peanut21s (F1)

Phabio (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Polka14 (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spoonbill (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Wachhund (F1)

Wee (F1)

WheatBerry18 (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

Cornie (F5)

MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes111
Has been Phamerated?Yes
Gene List

Click to View

Che9d_1
(HNH endonuclease)

Che9d_2
(terminase, small subunit)

Che9d_3
(terminase, large subunit)

Che9d_4
(portal)

Che9d_5
(capsid maturation protease)

Che9d_6
(scaffolding)

Che9d_7
(major capsid protein)

Che9d_8

Che9d_9

Che9d_10

Che9d_11

Che9d_12

Che9d_13

Che9d_14
(major tail subunit)

Che9d_15
(tail assembly chaperone)

Che9d_16
(tail assembly chaperone)

Che9d_17
(tape measure)

Che9d_18
(minor tail)

Che9d_19
(minor tail)

Che9d_20
(minor tail)

Che9d_21
(minor tail)

Che9d_22
(minor tail)

Che9d_23
(minor tail)

Che9d_24
(minor tail)

Che9d_25
(minor tail)

Che9d_26
(minor tail)

Che9d_27

Che9d_28
(transcriptional regulator; AlpA-like)

Che9d_29

Che9d_30

Che9d_31

Che9d_32

Che9d_33

Che9d_34

Che9d_35
(lysin A)

Che9d_36
(lysin B)

Che9d_37
(holin)

Che9d_38

Che9d_39

Che9d_40

Che9d_41

Che9d_42

Che9d_43

Che9d_44

Che9d_45

Che9d_46

Che9d_47

Che9d_48

Che9d_49

Che9d_50
(integrase (Y-int))

Che9d_51

Che9d_52

Che9d_53
(helix-turn-helix DNa binding protein)

Che9d_54
(antirepressor)

Che9d_55

Che9d_56

Che9d_57

Che9d_58

Che9d_59

Che9d_60

Che9d_61

Che9d_62

Che9d_63

Che9d_64

Che9d_65
(WhiB family transcription factor)

Che9d_66
(helix-turn-helix DNa binding protein)

Che9d_67

Che9d_68
(WhiB family transcription factor)

Che9d_69

Che9d_70

Che9d_71

Che9d_72

Che9d_73

Che9d_74
(RecA DNA recombinase)

Che9d_75
(HNH endonuclease)

Che9d_76
(DNa methylase)

Che9d_77
(DNA methylase)

Che9d_78

Che9d_79

Che9d_80
(DNA methylase)

Che9d_81

Che9d_82

Che9d_83

Che9d_84

Che9d_85

Che9d_86

Che9d_87

Che9d_88

Che9d_89

Che9d_90

Che9d_91

Che9d_92

Che9d_93

Che9d_94

Che9d_95

Che9d_96

Che9d_97

Che9d_98

Che9d_99

Che9d_100

Che9d_101

Che9d_102

Che9d_103

Che9d_104

Che9d_105

Che9d_106

Che9d_107
(transcriptional regulator; AlpA-like)

Che9d_108

Che9d_109
(glycosyl transferase)

Che9d_110
(galactosyl transferase)

Che9d_111
(glycosyl transferase)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionAY129336
Refseq NumberNC_004686
Available Files
Plaque PictureDownload
Virtual Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload