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Mycobacterium phage Dante
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Detailed Information for Phage Dante
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAlexander Hadik
Year Found2011
Location FoundProvidence, RI USA
Finding InstitutionBrown University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.81665 N, 71.39019 W Map
Discovery NotesRich river mud. Fine grain, very wet. Dark top layer. Much organic material present in sample. Found on river bank between rocks at mid-tide.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 9, 2012
Sequencing FacilityVirginia Commonwealth University Nucleic Acids Research Facilities
Shotgun Sequencing Method454 Pyrosequencing
Genome length (bp)59652
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGTAGGCGC
GC Content61.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Other Cluster Members

Click to View

AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

Barson (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

BuzzLyseyear (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Emma (F1)

Empress (F1)

Estave1 (F1)

Estella (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

Judylove (F1)

Kalikimaka (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LillyLatzon (F1)

Llama (F1)

Llij (F1)

Lysinator (F1)

MacDrage (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Mutaforma13 (F1)

Nemain (F1)

Nitzel (F1)

Noodle (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peanut21s (F1)

Phabio (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Polka14 (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spoonbill (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Wachhund (F1)

Wee (F1)

WheatBerry18 (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

Cornie (F5)

Plaque Notes3mm haloed plaque.
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes105
Has been Phamerated?Yes
Gene List

Click to View

Dante_1
(Terminase small subunit)

Dante_2
(Terminase large unit)

Dante_3
(Portal)

Dante_4
(Capsid maturation protease)

Dante_5
(Scaffolding)

Dante_6
(Major capsid)

Dante_7
(Head-to-tail connector)

Dante_8
(Head-to-tail connector)

Dante_9
(Head-to-tail connector)

Dante_10
(Head-to-tail connector)

Dante_11
(Major tail)

Dante_12
(Tail assembly chaperone)

Dante_13
(Tail assembly chaperone)

Dante_14
(Tapemeasure)

Dante_15
(Minor tail)

Dante_16
(Minor tail)

Dante_17
(Minir tail)

Dante_18
(Minor tail)

Dante_19
(D-alanyl-D-alanine-carboxypeptidase)

Dante_20

Dante_21

Dante_22

Dante_23

Dante_24

Dante_25

Dante_26

Dante_27

Dante_28

Dante_29

Dante_30
(Lysin A)

Dante_31
(Lysin B)

Dante_32
(Holin)

Dante_33

Dante_34

Dante_35
(DnaQ-like exonuclease)

Dante_36

Dante_37

Dante_38
(PLA2-like domain)

Dante_39

Dante_40
(HTH DNA Binding Domain)

Dante_41

Dante_42
(Integrase - Y-int)

Dante_43

Dante_44

Dante_45

Dante_46
(HTH Domain)

Dante_47
(Antirepressor)

Dante_48

Dante_49

Dante_50

Dante_51

Dante_52

Dante_53

Dante_54

Dante_55

Dante_56

Dante_57

Dante_58
(WhiB)

Dante_59

Dante_60
(WhiB)

Dante_61

Dante_62

Dante_63

Dante_64

Dante_65

Dante_66
(HNH Endonuclease)

Dante_67
(DNA Methylase)

Dante_68

Dante_69

Dante_70
(DNA Methylase)

Dante_71

Dante_72

Dante_73
(HNH endonuclease)

Dante_74

Dante_75

Dante_76

Dante_77

Dante_78

Dante_79

Dante_80

Dante_81

Dante_82

Dante_83

Dante_84

Dante_85

Dante_86

Dante_87

Dante_88

Dante_89

Dante_90

Dante_91

Dante_92

Dante_93

Dante_94

Dante_95

Dante_96

Dante_97

Dante_98

Dante_99

Dante_100

Dante_101
(Glycosyltransferase)

Dante_102

Dante_103
(N-acetylglucosaminyl transferase)

Dante_104
(HNH Endonuclease)

Dante_105
(HNH Endonuclease)

Submitted Annotation in DNA Master FormatDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKT309034
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload