Mycobacterium phage QuickMath
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Detailed Information for Phage QuickMath
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJonathan Khoo
Year Found2017
Location FoundPhiladelphia, PA USA
Finding InstitutionDrexel University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates39.956547 N, 75.1897 W Map
Discovery NotesThe sample was collected on 10/5/17 at 12:46 PM at a tree in front of the DAC at Drexel University while it was 80°F outside. The depth of soil dug was two inches and the soil was wet and had a lot of insects crawling around.
Naming NotesThe name comes from Big Shaq.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 31, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1379
Genome length (bp)57526
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGAAGGCGC
GC Content61.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

Renaud18 (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

BabytheFifth (F1)

Barson (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

BoomCrackaPop (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clifton (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Estella (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GreatPumpkin (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Judylove (F1)

Kalikimaka (F1)

Katya (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

Latretium (F1)

LillyLatzon (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Lysinator (F1)

MacDrage (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

MerrillCO18 (F1)

Mille (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Mozy (F1)

Ms6 (F1)

Mutaforma13 (F1)

Myosotis (F1)

Nemain (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

Noodle (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peanut21s (F1)

Phabio (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

Sandalphon (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

Taus (F1)

TDanisky (F1)

TonaldTDrump (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Wachhund (F1)

Wee (F1)

WheatBerry18 (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotation StatusIn GenBank
Plaque NotesThe plaque is round and approximately 2mm in diameter and clear.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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QuickMath_1
(terminase, small subunit)

QuickMath_2
(terminase, large subunit)

QuickMath_3
(portal protein)

QuickMath_4
(capsid maturation protease)

QuickMath_5
(scaffolding protein)

QuickMath_6
(major capsid protein)

QuickMath_7
(head-to-tail connector complex protein)

QuickMath_8
(head-to-tail connector complex protein)

QuickMath_9

QuickMath_10
(head-to-tail connector complex protein)

QuickMath_11
(major tail protein)

QuickMath_12
(tail assembly chaperone)

QuickMath_13
(tail assembly chaperone)

QuickMath_14
(tape measure protein)

QuickMath_15
(transposase)

QuickMath_16
(minor tail protein)

QuickMath_17
(minor tail protein)

QuickMath_18

QuickMath_19
(minor tail protein)

QuickMath_20
(minor tail protein, D-ala-D-ala carboxypeptidase)

QuickMath_21

QuickMath_22

QuickMath_23

QuickMath_24

QuickMath_25

QuickMath_26

QuickMath_27

QuickMath_28

QuickMath_29

QuickMath_30

QuickMath_31
(lysinA)

QuickMath_32
(lysinB)

QuickMath_33
(holin)

QuickMath_34

QuickMath_35

QuickMath_36
(DnaQ exonuclease (DNA polymerase III subunit))

QuickMath_37

QuickMath_38

QuickMath_39

QuickMath_40

QuickMath_41

QuickMath_42

QuickMath_43
(integrase, (Y-int))

QuickMath_44

QuickMath_45

QuickMath_46
(Cro (control of repressor s operator))

QuickMath_47
(antirepressor)

QuickMath_48

QuickMath_49

QuickMath_50

QuickMath_51

QuickMath_52
(excise)

QuickMath_53

QuickMath_54

QuickMath_55

QuickMath_56

QuickMath_57

QuickMath_58
(WhiB family transcription factor)

QuickMath_59
(helix-turn-helix DNA binding domain)

QuickMath_60
(helix-turn-helix DNA binding domain)

QuickMath_61
(WhiB family transcription factor)

QuickMath_62
(helix-turn-helix DNA binding domain)

QuickMath_63

QuickMath_64

QuickMath_65

QuickMath_66

QuickMath_67

QuickMath_68

QuickMath_69
(HNH endonuclease)

QuickMath_70

QuickMath_71

QuickMath_72
(G-I-Y Y-I-G endonuclease)

QuickMath_73

QuickMath_74

QuickMath_75

QuickMath_76

QuickMath_77

QuickMath_78

QuickMath_79

QuickMath_80

QuickMath_81

QuickMath_82

QuickMath_83

QuickMath_84

QuickMath_85

QuickMath_86

QuickMath_87

QuickMath_88

QuickMath_89

QuickMath_90

QuickMath_91

QuickMath_92

QuickMath_93

QuickMath_94

QuickMath_95
(HTH DNA binding protein, MerR-like)

QuickMath_96

QuickMath_97

QuickMath_98

QuickMath_99

QuickMath_100

QuickMath_101

QuickMath_102
(glycosyltransferase)

QuickMath_103
(serine/threonine kinase)

QuickMath_104

QuickMath_105
(glycosyltransferase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH669012
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 61
Pitt Freezer Box Grid# C10
Available Files
GenBank File for PhameratorDownload