| Detailed Information for Phage Agaliana |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Liliana Brandt, Agam Zadok, Kissaou Tchedre |
| Year Found | 2023 |
| Location Found | Austin, TX USA |
| Finding Institution | Austin Community College Highland Campus |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 37°C |
| GPS Coordinates | 30.267593 N, 97.705416 W Map |
| Discovery Notes | In front of Austin Community College Campus building 9000. Collected from under a tree near a watering hose. |
| Naming Notes | This is a mixture of both our names (Agam and Liliana). |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 7, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1111 |
| Genome length (bp) | 49659 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGATGGTAA |
| GC Content | 63.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | A |
| Subcluster | A1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Austin Community College Highland Campus |
| Annotation Status | Overdue (Expected completion by 11/30/2024) |
| Plaque Notes | Icosahedral and head-tail geometries with a filamentous, cross-banded, noncontractile tail. |
| Morphotype | Siphoviridae |
| Number of Genes | 87 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
170 |
| Pitt Freezer Box Grid# |
B8 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
