Detailed Information for Phage Flaverint |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Dathan Stone |
Year Found | 2015 |
Location Found | New haven, CT USA |
Finding Institution | Southern Connecticut State University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 42°C |
GPS Coordinates | 41.3352 N, 72.9414 W Map |
Discovery Notes | This phage was found a a few meters away from a compost pile. Trees and vegetation covered the ground that was moist at the time. |
Naming Notes | Flavoring in Latin means "blowout". Throughout every purification round I would have plates that have been completely covered in plaques. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 3, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 12068 |
Genome length (bp) | 52593 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGTCGGTTA |
GC Content | 63.7% |
Sequencing Notes | at position 5765 bp approximately 38% of reads have a T rather than consensus C |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A11 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Texas A & M University-Galveston |
Annotation Status | In GenBank |
Plaque Notes | temperate phage morphology. 3 mm is the average plaque size. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MW055904 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
8x10^10 |
Pitt Freezer Box# |
23 |
Pitt Freezer Box Grid# |
H6 |
Available Files |
GenBank File for Phamerator | Download |