Detailed Information for Phage Sabinator |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Former names | Sabinator88 |
Found By | Devin Sabin |
Year Found | 2009 |
Location Found | Provo Canyon, UT USA |
Finding Institution | Brigham Young University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.339683 N, 111.605483 W Map |
Discovery Notes | Found on 1 Sep. 2009 at 3:00 p.m. Approx. temp. was 65°. The sample was from a dry ditch at the base of a tree with a depth of three inches. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 4, 2014 |
Sequencing Facility | BYU DNA Sequencing Center |
Shotgun Sequencing Method | 454 Pyrosequencing |
Approximate Shotgun Coverage | 349 |
Genome length (bp) | 50883 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGGTGGTAA |
GC Content | 64.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | turbid concentric circles at approx. 3mm in diameter. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KX808129 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Designator |
2009BRYOsabinator88DS |
SEA Lysate Titer |
unknown |
Pitt Freezer Box# |
1 |
Pitt Freezer Box Grid# |
5 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |