Detailed Information for Phage Phonnegut |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Sara Sewelson |
Year Found | 2016 |
Location Found | Palm City, FL USA |
Finding Institution | Indian River State College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 27.152305 N, 80.319942 W Map |
Discovery Notes | Soil sample taken from inside a chicken coop. Rich, dark, damp soil with an abundance of organic matter. Ambient temperature was approximately 90F. |
Naming Notes | Named for my favorite author, Kurt Vonnegut. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 2, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2980 |
Genome length (bp) | 53219 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGTCGGTTA |
GC Content | 62.6% |
Sequencing Notes | Approximately 40% of the reads in this sample indicated a 1667 bp deletion from position 3425 to position 5091, inclusive. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A9 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MG872840 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
54 |
Pitt Freezer Box Grid# |
A1 |
Available Files |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |