Detailed Information for Phage DekHockey33 |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Kristen Butela |
Year Found | 2020 |
Location Found | McKeesport, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.31672 N, 79.8045 W Map |
Discovery Notes | Sample collected by Suzanne Cafasso. Soil was slightly moist and had some decaying plant material present. Sample yielded two phages on G. terrae and one on G.rubripertincta, all with different plaque morphologies. |
Naming Notes | Named in honor of one of the nicest people and best dek hockey goalies in the Greater Pittsburgh area. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 24, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1769 |
Genome length (bp) | 52969 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGGTGGTTA |
GC Content | 62.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A15 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Washington State University |
Annotation Status | Awaiting_QC |
Plaque Notes | Produces large haloed plaques, 3-4 mm in diameter. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
125 |
Pitt Freezer Box Grid# |
D2 |