Detailed Information for Phage Manu |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Hannah Jacobs |
Year Found | 2019 |
Location Found | Bismarck, ND United States |
Finding Institution | University of Mary |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 19°C |
GPS Coordinates | 46.7725 N, 100.6464 W Map |
Discovery Notes | I found it at a horse stable in a manure pile |
Naming Notes | I named it Manu |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 22, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1744 |
Genome length (bp) | 50577 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGGTGGTAA |
GC Content | 64.0% |
Sequencing Notes | When sequenced, this phage (a Cluster A3) had a low level (<10%) of the reads that belonged to a Cluster A1 phage, so it's possible this sample isn't totally pure. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Mary |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MT657331 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
111 |
Pitt Freezer Box Grid# |
E2 |
Available Files |
GenBank File for Phamerator | Download |