Detailed Information for Phage Epsocamisio |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Libbee Currie, Lauren Cusson |
Year Found | 2019 |
Location Found | Presque Isle, ME USA |
Finding Institution | University of Maine, Honors College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 19°C |
GPS Coordinates | 46.7104 N, 67.9298 W Map |
Discovery Notes | The soil was collected from a chicken coop on a farm in Presque Isle, ME. The soil was full of chicken excrement. It was fine muddy soil with very little vegetation. |
Naming Notes | Epsocamisio was the name of my organism that I (Lauren) had to create and name for one of my 4th grade projects. I (Lauren) thought it would be cool to resurrect the name. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 25, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 28 |
Genome length (bp) | 52314 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGGTGGTTA |
GC Content | 62.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A15 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Maine, Honors College |
Annotation Status | In GenBank |
Plaque Notes | The plaques are fairly large and round. They have a turbid halo with a small clear center. The phage plaque picture is the result of picking a plaque off of a streak plate and tittering it. This particular plate is the 10^-1 dilution. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MT522007 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
109 |
Pitt Freezer Box Grid# |
F1 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |