| Detailed Information for Phage Updawg |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Former names | Updawg |
| Found By | Patrick Osterhaus |
| Year Found | 2012 |
| Location Found | KY USA |
| Finding Institution | Western Kentucky University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 36.58757 N, 87.8431 W Map |
| Discovery Notes | Isolated from road within close proximity to a major highway within Kentucky. |
| Naming Notes | "Updawg" is a play on words. Someday, I hope someone asks: "What's Updawg?" |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | May 12, 2014 |
| Sequencing Facility | Virginia Commonwealth University Nucleic Acids Research Facilities |
| Shotgun Sequencing Method | 454 Pyrosequencing |
| Approximate Shotgun Coverage | 170 |
| Genome length (bp) | 53043 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGTCGGTTA |
| GC Content | 63.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | A |
| Subcluster | A2 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotation Status | In GenBank |
| Plaque Notes | Plaques formed by these bacteriophages are extremely turbid. |
| Morphotype | Siphoviridae |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MF919538 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
43 |
| Pitt Freezer Box Grid# |
18 |
| Available Files |
| EM Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |
