Detailed Information for Phage Updawg |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Former names | Updawg |
Found By | Patrick Osterhaus |
Year Found | 2012 |
Location Found | KY USA |
Finding Institution | Western Kentucky University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 36.58757 N, 87.8431 W Map |
Discovery Notes | Isolated from road within close proximity to a major highway within Kentucky. |
Naming Notes | "Updawg" is a play on words. Someday, I hope someone asks: "What's Updawg?" |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | May 12, 2014 |
Sequencing Facility | Virginia Commonwealth University Nucleic Acids Research Facilities |
Shotgun Sequencing Method | 454 Pyrosequencing |
Approximate Shotgun Coverage | 170 |
Genome length (bp) | 53043 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGTCGGTTA |
GC Content | 63.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A2 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Plaques formed by these bacteriophages are extremely turbid. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MF919538 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
43 |
Pitt Freezer Box Grid# |
18 |
Available Files |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |