Detailed Information for Phage Penny1 |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Nicole Cullen |
Year Found | 2014 |
Location Found | Providence, RI USA |
Finding Institution | Providence College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 41.8433 N, 71.4346 W Map |
Discovery Notes | Soil sample taken on May 27 at 2:30pm. Phage obtained from soil sample taken from dry soil 2" deep under a tree in front of Albertus Magnus Hall. The weather was 72 degrees Fahrenheit, cloudy and 64% humidity. |
Naming Notes | Penny named after character from the show Big Bang Theory. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 6, 2015 |
Sequencing Facility | NC State Genomic Sciences Laboratory |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2638 |
Genome length (bp) | 50884 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGGTGGTAA |
GC Content | 64.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Forms circular plaques about 3.5nm in diameter.
|
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KX458237 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1.5 x 10^9 pfu/mL |
Date of SEA Lysate Titering |
Jun 26, 2014 |
Pitt Freezer Box# |
89 |
Pitt Freezer Box Grid# |
E7 |
Available Files |
Plaque Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |