Detailed Information for Phage Priamo |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Priamo A. Pichardo-Gonzalez |
Year Found | 2015 |
Location Found | Gurabo, PR USA |
Finding Institution | University of Puerto Rico at Cayey |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 18.254471 N, 65.961662 W Map |
Discovery Notes | Found near a creek. There were many leaves on the ground. Sample was taken from under the leaves. Temp. was 89 F. |
Naming Notes | Priamo is a heritage name, passed down since my great grandfather. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 5, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 266 |
Genome length (bp) | 51633 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGTCGGTAA |
GC Content | 61.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A6 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Puerto Rico at Cayey |
Annotation Status | In GenBank |
Plaque Notes | Clear plaques. They were huge, approx. up to 8 mm in diameter. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH155876 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
SEA Lysate Titer |
5.9 X 10^11 PFU/mL |
Available Files |
EM Picture | Download |
GenBank File for Phamerator | Download |