Detailed Information for Phage LBerry |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Nathan Berry and Kathleen Cornely |
Year Found | 2022 |
Location Found | Henrietta, NY United States |
Finding Institution | Providence College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 43.058056 N, 77.650556 W Map |
Discovery Notes | The sample was collected outside of a hotel in Henrietta, New York at noon. The weather was 56 degrees Fahrenheit (13.3 deg Celsius) and it was mostly cloudy. The soil was mostly dry and pretty clumpy; it was collected under a layer of mulch. |
Naming Notes | This phage is named after my family surname, "Berry". There is a joke in my family of LBs as many of the members have a first name that starts with L. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 7, 2023 |
Sequencing Facility | NC State Genomic Sciences Laboratory |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 276 |
Genome length (bp) | 50965 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGGTGGTAA |
GC Content | 64.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Providence College |
Annotation Status | Being Annotated (Expected completion by 10/1/2023) |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
162 |
Pitt Freezer Box Grid# |
F11 |