Detailed Information for Phage Hookmount |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Henry Stoddard III and Maileah Cha |
Year Found | 2015 |
Location Found | Congers, NY USA |
Finding Institution | Nyack College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 41.143611 N, 73.912778 W Map |
Discovery Notes | Soil was from a forest. It was dark-brown, moist, and granular. Trees surrounded the dirt; cement pavement was located about 20ft away. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 15, 2015 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2938 |
Genome length (bp) | 50061 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGCCGGTAA |
GC Content | 64.1% |
Sequencing Notes | at position 24122 about 18% of reads have a G rather than the consensus A |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Nyack College |
Annotation Status | In GenBank |
Plaque Notes | Plaque Morphology (after 24hrs): - Diameter: 1-1.5mm - Clarity of Plaque: Clear |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH316563 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1 x 10^10 pfu/mL |
Date of SEA Lysate Titering |
Oct 27, 2015 |
Pitt Freezer Box# |
22 |
Pitt Freezer Box Grid# |
G5 |
Available Files |
GenBank File for Phamerator | Download |