| Detailed Information for Phage Alvin |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Brittany Dey |
| Year Found | 2014 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.447047 N, 79.956118 W Map |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | May 27, 2014 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Ion Torrent Sequencing |
| Approximate Shotgun Coverage | 532 |
| Sanger Finishing Reactions | 6 |
| Genome length (bp) | 49577 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGATGGTAA |
| GC Content | 63.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | A |
| Subcluster | A1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotation Status | In GenBank |
| Plaque Notes | Makes plaques that are 3-3.5mm in size. Plaques have a turbid halo on the edges and a clear bulls-eye center. |
| Morphotype | Siphoviridae |
| Number of Genes | 86 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KP027205 |
| Refseq Number | NC_026583 |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
4 |
| Pitt Freezer Box Grid# |
D12 |
| Available Files |
| EM Picture | Download |
| Final DNAMaster File | Download |
