Mycobacterium phage GageAP
GageAP EM Picture
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Detailed Information for Phage GageAP
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMadison Roll/ Atticus Proctor
Year Found2013
Location FoundHelena, MT USA
Finding InstitutionMontana Technological University
ProgramMontana Tech Bringing Research Into the Classroom
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates46.6002 N, 112.054 W Map
Discovery NotesFound in garden soil. Outreach visit to CR Anderson Middle School Helena, MT.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 18, 2014
Sequencing FacilityVirginia Commonwealth University Nucleic Acids Research Facilities
Shotgun Sequencing Method454
Sequencer Used454 Genome Sequencer FLX
Approximate Shotgun Coverage425
Sanger Finishing Reactions2
Genome length (bp)51904
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGATGGTAA
GC Content63.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterA
SubclusterA1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionHelena High School
Annotation StatusIn GenBank
Plaque NotesLarge turbid plaques with halos.
MorphotypeSiphoviridae
Number of Genes91
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH020236
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 3
Pitt Freezer Box Grid# G9
Available Files
EM PictureDownload
GenBank File for PhameratorDownload