The Actinobacteriophage Database

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Detailed Information for Phage Indra
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Found By	Serene Thomas
Year Found	2019
Location Found	Washington DC, DC United States of America
Finding Institution	Howard University
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Unknown
Isolation Temperature	27°C
GPS Coordinates	38.0 N, 77.0 W Map
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Aug 27, 2020
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Illumina
Sequencer Used	Illumina MiSeq
Read Type	Single-end reads
Read Length	150 bp
Approximate Shotgun Coverage	972
Genome length (bp)	52493
Character of genome ends	3' Sticky Overhang
Overhang Length	10 bases
Overhang Sequence	CGGTCGGTTA
GC Content	61.5%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	A
Subcluster	A6
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View Chargerpower (None) Abbyshoes (A1) Abrogate (A1) Acme (A1) Adahisdi (A1) Aeneas (A1) AFIS (A1) Agaliana (A1) Ajay (A1) Alsfro (A1) Altman (A1) Alvin (A1) Anglerfish (A1) Applejack (A1) Arcanine (A1) Arlo (A1) Ashballer (A1) Atkinbua (A1) BaconJack (A1) Barriga (A1) BarrowTuph (A1) Beatrix (A1) BeesKnees (A1) Bethlehem (A1) Bexan (A1) Big3 (A1) Bigchungi (A1) Bigfoot (A1) BigMau (A1) BigPaolini (A1) BillKnuckles (A1) Bircsak (A1) Blue (A1) BluSpix (A1) Bob3 (A1) Bones (A1) BPBiebs31 (A1) Briton15 (A1) Bruns (A1) Burton (A1) Buttons (A1) Bxb1 (A1) CactusRose (A1) Carlyle (A1) Chanagan (A1) Ciao (A1) ConceptII (A1) Corvo (A1) Crispicous1 (A1) Cueylyss (A1) DD5 (A1) Dexes (A1) Doom (A1) Dreamboat (A1) DreamCatcher (A1) DrFeelGood (A1) Dulcie (A1) Dussy (A1) Dynamix (A1) Edtherson (A1) EnzoK (A1) Espresso (A1) Euphoria (A1) Eyeball (A1) Fajezeel (A1) Fascinus (A1) Fenn (A1) Forsytheast (A1) Francis47 (A1) Froghopper (A1) Fushigi (A1) GageAP (A1) Gandalf20 (A1) GMonster (A1) Gompeii16 (A1) Graduation (A1) GrecoEtereo (A1) Greg (A1) Gwendoluna (A1) Gyzlar (A1) Hami1 (A1) HanShotFirst (A1) HarryOW (A1) Hermia (A1) HermioneGrange (A1) Homines (A1) Hope4ever (A1) Ichabod (A1) IgnatiusPatJac (A1) ILeeKay (A1) Inyanga (A1) Iqorha (A1) JackSparrow (A1) Jasper (A1) JC27 (A1) Jerm2 (A1) Jorgensen (A1) JuliaChild (A1) Kanely (A1) KBG (A1) Kenmech (A1) Killigrew (A1) KSSJEB (A1) Kugel (A1) Kykar (A1) KyMonks1A (A1) Lamina13 (A1) Lesedi (A1) Levia (A1) Licorice (A1) LilBib (A1) Lockley (A1) Lopton (A1) LunarLander (A1) Magnar (A1) Magnito (A1) Makemake (A1) Manatee (A1) Marcell (A1) Marchy (A1) Marco3 (A1) Marge (A1) Maroc7 (A1) Marsha (A1) MaryBeth (A1) McGuire (A1) McSinger (A1) MetalQZJ (A1) Michley (A1) Mkhuseli (A1) Molly (A1) Monet (A1) Moose (A1) MPlant7149 (A1) MrGordo (A1) Mryolo (A1) Mule (A1) Museum (A1) Naira (A1) NEHalo (A1) Nerujay (A1) Nhonho (A1) Niza (A1) Norz (A1) Ohno789 (A1) Oogway (A1) PacerPaul (A1) Papez (A1) Paphu (A1) Paraselene (A1) Pari (A1) Parliament (A1) PascalRango (A1) PattyP (A1) Payneful (A1) Pelly (A1) Pepe (A1) Perseus (A1) Peterson (A1) Petp2012 (A1) Petruchio (A1) PherrisBueller (A1) PhineBark (A1) Phlippers (A1) PhrostyMug (A1) PinkPlastic (A1) Pinto (A1) Pippin (A1) Pita2 (A1) ProMouse (A1) PSullivan (A1) QTRlifeCrisis (A1) Raid (A1) Rajelicia (A1) Rhynn (A1) RidgeCB (A1) Ringer (A1) Rohr (A1) Rubeus (A1) Rufus (A1) Ruotula (A1) Rutherferd (A1) Sagefire (A1) Sandaddy (A1) Sanya (A1) SarFire (A1) Scowl (A1) Seabiscuit (A1) Seanderson (A1) ShortQueendom (A1) Sibs6 (A1) SkiPole (A1) Slagathor (A1) Smairt (A1) Smeagol (A1) Snazzy (A1) Solon (A1) Sorpresa (A1) SpikeBT (A1) Squee (A1) StewieG (A1) STLscum (A1) StrongArm (A1) Sumter (A1) Sunshine924 (A1) SwissCheese (A1) Switzer (A1) Swole (A1) Target (A1) Tasp14 (A1) Teodoridan (A1) TheloniousMonk (A1) Thor (A1) Topgun (A1) Tote (A1) Traft412 (A1) Treddle (A1) Tripl3t (A1) Trouble (A1) Turj99 (A1) TwoPeat (A1) U2 (A1) Violet (A1) Watermelon (A1) Wheeler (A1) Wilkins (A1) Zeeculate (A1) Zephyr (A1) Zeuska (A1) Chupacabra (A10) DontArgue (A10) Drake94 (A10) DustyMartin (A10) Eaglepride (A10) Edison31 (A10) Goose (A10) KittenMittens (A10) Kristoff (A10) OKCentral2016 (A10) PeaceMeal1 (A10) Poompha (A10) Rebeuca (A10) RhynO (A10) Rowdy (A10) Severus (A10) Shapes (A10) Topanga (A10) Trike (A10) Twister (A10) WalterMcMickey (A10) Aneem (A11) Bachome (A11) Bowtie (A11) Bud (A11) Ebony (A11) Et2Brutus (A11) Fibonacci (A11) Flaverint (A11) Gilberta (A11) Hutc2 (A11) Insomnia (A11) Jabith (A11) Joselito (A11) Lucivia (A11) Mabel (A11) MaCh (A11) Mulciber (A11) Munch (A11) Orange (A11) Petersenfast (A11) Salz (A11) Sham4 (A11) Snape (A11) Timothy (A11) TinyTimmy (A11) DarthPhader (A12) Pharaoh (A12) Refuge (A12) Steamy (A12) Zimmer (A12) Phlei (A13) Gail (A14) Jeeves (A14) Luchador (A14) SororFago (A14) Sunhee (A14) Anaysia (A15) Anon (A15) Battleship (A15) Boohoo (A15) DekHockey33 (A15) Epsocamisio (A15) JSwag (A15) KatherineG (A15) LastResort (A15) Looper (A15) MinecraftSteve (A15) Nebulosus (A15) Nedarya (A15) Oofda (A15) ReMo (A15) Remus (A15) Rosalind (A15) ShayRa (A15) Soups (A15) Strosahl (A15) Switzerland (A15) Waits (A15) Warrior24 (A15) EagleEye (A16) Lucyedi (A16) PainterBoy (A16) 40AC (A17) MyraDee (A18) Kimona (A19) 20ES (A2) AbbyPaige (A2) Acolyte (A2) Adzzy (A2) Agape74 (A2) AN3 (A2) AN9 (A2) ANI8 (A2) AnnaL29 (A2) Anselm (A2) ArcherNM (A2) BabyBack (A2) Bactobuster (A2) Baehexic (A2) BengiVuitton (A2) Benvolio (A2) BiancaTri92 (A2) BobSwaget (A2) Bradman (A2) Bugsy (A2) Caraxes (A2) Centaur (A2) Changeling (A2) Che12 (A2) ChipMunk (A2) Colin (A2) CRB1 (A2) Crucio (A2) D29 (A2) D32 (A2) Dalmatian (A2) DBQu4n (A2) Deloris (A2) Dignity (A2) Drake55 (A2) DudeLittle (A2) Duplo (A2) Echild (A2) Equemioh13 (A2) EvilGenius (A2) EZMoney23 (A2) Fameo (A2) FiringLine (A2) First (A2) Flare16 (A2) GaugeLDP (A2) Georgie2 (A2) Gratitude (A2) HarryHoudini (A2) Heffalump (A2) Herbertwm (A2) IronMan (A2) Iwokeuplikedis (A2) Jaan (A2) Jerm (A2) JoshKayV (A2) Journey13 (A2) Jsquared (A2) Kalpine (A2) Kerberos (A2) KingCyrus (A2) Koduck (A2) L5 (A2) LadyBird (A2) Landor (A2) Larenn (A2) Leogania (A2) Leviathan (A2) LilTurb (A2) LionsBait (A2) Lokk (A2) Loser (A2) MajorMajor (A2) Malec (A2) MiculUcigas (A2) Miko (A2) MissWhite (A2) Naji (A2) NaSiaTalie (A2) NicoleTera (A2) NothingSpecial (A2) Odin (A2) Ph8s (A2) Phaded (A2) Piro94 (A2) Pomar16 (A2) Power (A2) Pukovnik (A2) QueenB2 (A2) QueenBeesly (A2) Quokka (A2) Rachaly (A2) RedRock (A2) Retro23 (A2) SemperFi (A2) Serenity (A2) Sknot (A2) Smeagan (A2) SnapTap (A2) StarStuff (A2) Superchunk (A2) SweetiePie (A2) SwirlSquare (A2) TarsusIV (A2) Terrific (A2) TipsytheTRex (A2) Tomathan (A2) Travvers (A2) Tristan (A2) Trixie (A2) Trooper (A2) Turbido (A2) Updawg (A2) VA6 (A2) VC3 (A2) WeiHuaDA (A2) Whabigail7 (A2) WideWale (A2) XianYue (A2) Anthony (A20) FatCactus (A20) Kinmap (A21) ACFishhook (A3) Aglet (A3) AgronaGT15 (A3) Anubis (A3) AugsMagnumOpus (A3) BabyJohn (A3) BabyRay (A3) Beauxregard13 (A3) Bigflo (A3) BlueBird (A3) BreSam8 (A3) Bugatti (A3) BuzzBuzz (A3) Bxz2 (A3) Calvinny (A3) Caviar (A3) Chiqui (A3) Colbster (A3) Cullens (A3) DaHudson (A3) Daishi (A3) Dieselweasel (A3) DropBear (A3) EpicPhail (A3) Farber (A3) Fernando (A3) Fred313 (A3) Gemma (A3) GingkoMaracino (A3) Giroux (A3) Grif (A3) Groupthink (A3) Grub (A3) Grum1 (A3) GtownJaz (A3) HashRod (A3) HaveUMetTed (A3) Heathen (A3) HelDan (A3) Heliosoles (A3) Hercules11 (A3) Hookmount (A3) Idleandcovert (A3) Isca (A3) JenCasNa (A3) JeppNRM (A3) JF2 (A3) JF4 (A3) JHC117 (A3) Jobu08 (A3) Kachowdy (A3) KADY (A3) Kalb97 (A3) Kalnoky (A3) Lambert1 (A3) LarryKay (A3) LBerry (A3) Lilith (A3) Louie6 (A3) Lowa (A3) LugYA (A3) MA5 (A3) MadMarie (A3) Mainiac (A3) Malinsilva (A3) Manu (A3) Marchesa (A3) Margo (A3) Marie (A3) Marius (A3) MarQuardt (A3) Methuselah (A3) Microwolf (A3) Misomonster (A3) MK4 (A3) MoneyMay (A3) MuchMore (A3) Noella (A3) Norbert (A3) OlanP (A3) Ollie (A3) P28Green (A3) Panamaxus (A3) Pawn (A3) Pembroke (A3) Penny1 (A3) PGHhamlin (A3) Phantastic (A3) PhishRPhriends (A3) Phoebe (A3) Phoxy (A3) Phranny (A3) Pistachio (A3) Pocahontas (A3) Popcicle (A3) PotatoSplit (A3) Puppy (A3) PurpleHaze (A3) QuinnKiro (A3) Reba (A3) ResDef (A3) Rockstar (A3) Rummer (A3) Sabia (A3) Sabinator (A3) SaturnRing (A3) Scout (A3) Snickers (A3) SoilDragon (A3) Soshari (A3) SoYo (A3) Spike509 (A3) Stagni (A3) StepMih (A3) Taurus (A3) Texage (A3) Tiffany (A3) TinyPebbles (A3) TNguyen7 (A3) Todacoro (A3) Veracruz (A3) Vix (A3) Watson (A3) Wooldri (A3) Zetzy (A3) AbbysRanger (A4) Abdiel (A4) Achebe (A4) Albee (A4) Alberto7 (A4) Annyong (A4) Arturo (A4) AvatarAhPeg (A4) Avle17 (A4) Baby16 (A4) Backyardigan (A4) Badger (A4) BangNhom (A4) Bartimeaus (A4) BellusTerra (A4) Blackmoor (A4) Bombshell (A4) Broseidon (A4) Bruiser (A4) BubbleTrouble (A4) Bumblebee11 (A4) Burger (A4) Caelakin (A4) Camperdownii (A4) CentreCat (A4) Cerulean (A4) ChampagnePapi (A4) Chaph (A4) Cici (A4) Cindaradix (A4) Cintron (A4) Citius (A4) Clarenza (A4) Cocoaberry (A4) Commander (A4) Connomayer (A4) Datway (A4) Deano (A4) Dhanush (A4) DirtyDunning (A4) Druantia (A4) Eagle (A4) Eapen (A4) Eris (A4) Eros (A4) Eurydice (A4) Florean (A4) Flux (A4) Funston (A4) Gadost (A4) HamSlice (A4) Happiness (A4) Holli (A4) Houdini22 (A4) Huxley (A4) Iceman (A4) ICleared (A4) Iracema64 (A4) Jaykayelowell (A4) JetBlade (A4) JoongJeon (A4) Kampy (A4) Katalie136 (A4) KFPoly (A4) Kingmustik0402 (A4) Koan (A4) Koreni (A4) Kratark (A4) Kremtemulon (A4) Kyee (A4) LappelDuVide (A4) Lemur (A4) LeoAvram (A4) LHTSCC (A4) LittleB (A4) LittleGuy (A4) LochMonster (A4) Lorenzo (A4) Lunsford (A4) Maverick (A4) Maxo (A4) Mayonnaise (A4) Mazhar510 (A4) Medusa (A4) MeeZee (A4) Melvin (A4) Millski (A4) Miramae (A4) Morpher26 (A4) Morrow (A4) Mundrea (A4) Nebs (A4) Nemo27 (A4) Noelle (A4) NorthStar (A4) NotAPhaseMom (A4) Nyxis (A4) Obama12 (A4) Ohfah (A4) OKaNui (A4) Palestino (A4) Peaches (A4) Perplexer (A4) PeterPeter (A4) PetiteSangsue (A4) Phacado (A4) Phelipe (A4) Phighter1804 (A4) Phontbonne (A4) Pipcraft (A4) Polymorphads (A4) Pumbaa (A4) Relief (A4) Romney (A4) Roosevelt (A4) Rosa24 (A4) Ruin (A4) Sabertooth (A4) Scamp (A4) SenorClean (A4) Shaka (A4) SheldonCooper (A4) Shygu2 (A4) Skipitt (A4) Sparxx (A4) Spino (A4) Stasia (A4) Stink (A4) Taquarus (A4) Thanksgivukkah (A4) TinaFeyge (A4) Tinybot (A4) TiroTheta9 (A4) TroyPia (A4) TygerBlood (A4) Ulysses (A4) Wander (A4) Wilbur (A4) Wile (A4) Wizard007 (A4) Xena (A4) YoSam321 (A4) AgentM (A5) Airmid (A5) Aragog (A5) Archetta (A5) Benedict (A5) Bluefalcon (A5) Bonamassa (A5) Chadwick (A5) Conspiracy (A5) Coog (A5) Cuco (A5) Discoknowium (A5) Dublin (A5) ElTiger69 (A5) ForGetIt (A5) George (A5) Ghoulboy (A5) HuhtaEnerson15 (A5) Jabiru (A5) Jovo (A5) Lev2 (A5) LittleCherry (A5) MarysWell (A5) Micasa (A5) Midas2 (A5) Milcery (A5) Naca (A5) PetterN (A5) Phlorence (A5) PickleBack (A5) Prinashe11 (A5) Scorpia (A5) Swirley (A5) SydNat (A5) Tarynearal (A5) Theia (A5) Tiger (A5) Twigg (A5) UnionJack (A5) Zolita (A5) Artemis2UCLA (A6) BABullseye (A6) BlessJoy (A6) Blinn1 (A6) Blue7 (A6) Candra (A6) Chartreuse (A6) CloudWang3 (A6) Cookiedough (A6) DaVinci (A6) Dorothea (A6) EricB (A6) Garak (A6) Gladiator (A6) GreedyLawyer (A6) Gruunaga (A6) Hammer (A6) Helmet (A6) Hexamo (A6) Hoot (A6) Indra (A6) Isiphiwo (A6) Jeffabunny (A6) JewelBug (A6) Jordennis (A6) Kazan (A6) Kipper29 (A6) Koko (A6) Lilbunny (A6) McFly (A6) Neeharika16 (A6) Newrala (A6) Pmask (A6) Polyphemus (A6) Priamo (A6) Rifter (A6) Roksolana (A6) SmellyB (A6) SuperAwesome (A6) SuperCallie99 (A6) Temprado (A6) ToneTone (A6) Tucker (A6) VohminGhazi (A6) Wiks (A6) WunderPhul (A6) Yokurt (A6) Zaka (A6) Zulu (A6) DroogsArmy (A7) FlyCatcher (A7) HINdeR (A7) Sheen (A7) Timshel (A7) Toro (A7) Astro (A8) Danforth (A8) Dixon (A8) Expelliarmus (A8) Groundhog (A8) NearlyHeadless (A8) Phillis (A8) Roary (A8) Saintus (A8) Smeadley (A8) Stephig9 (A8) Aliter (A9) Alma (A9) Arissanae (A9) Beemo (A9) BogosyJay (A9) Catalina (A9) Charm (A9) Conquerage (A9) Darrell (A9) DreamTeam1 (A9) EdogawaKiddo (A9) Eidsmoe (A9) Elephantoon (A9) EmyBug (A9) ExplosioNervosa (A9) Fayely (A9) Hanray (A9) Holex (A9) HortumSL17 (A9) Jiawan (A9) Keziacharles14 (A9) Lilleskat (A9) LoneWolf (A9) Maminiaina (A9) Myxus (A9) Onglai (A9) PackMan (A9) Phaeder (A9) Phonnegut (A9) Pioneer (A9) Priya (A9) Qobbit (A9) Rahalelujah (A9) RyeScarlet (A9) Sachima (A9) Scherzo (A9) SheaKeira (A9) Spouty (A9) Toaka (A9) Tubs (A9) Ugenie5 (A9) Vanisoa (A9) Yecey3 (A9)
Annotating Institution	Howard University
Annotation Status	In GenBank
Plaque Notes	Large plaques Lysogenic
Morphotype	Siphoviridae
Number of Genes	102
Number of tRNAs	3
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View Indra_1 Indra_2 (metalloprotease) Indra_3 Indra_4 (HNH endonuclease) Indra_5 (terminase small subunit) Indra_6 Indra_7 Indra_8 Indra_9 — tRNA (tRNA-Asn(gtt)) Indra_10 — tRNA (tRNA-Trp(cca)) Indra_11 — tRNA (tRNA-Gln(ctg)) Indra_12 Indra_13 (lysin A) Indra_14 (holin) Indra_15 (terminase large subunit) Indra_16 (portal protein) Indra_17 (capsid maturation protease) Indra_18 (scaffolding protein) Indra_19 (major capsid protein) Indra_20 Indra_21 (head-to-tail adaptor) Indra_22 Indra_23 (head-to-tail stopper) Indra_24 Indra_25 (tail terminator) Indra_26 (major tail protein) Indra_27 (tail assembly chaperone) Indra_28 (tail assembly chaperone) Indra_29 (tape measure protein) Indra_30 (minor tail protein) Indra_31 (minor tail protein) Indra_32 Indra_33 Indra_34 (minor tail protein) Indra_35 Indra_36 Indra_37 Indra_38 Indra_39 (ParA-like dsDNA partitioning protein) Indra_40 (ParB-like dsDNA partitioning protein) Indra_41 Indra_42 (deoxycytidylate deaminase) Indra_43 Indra_44 Indra_45 Indra_46 Indra_47 Indra_48 (DNA polymerase I) Indra_49 Indra_50 Indra_51 (RNA ligase) Indra_52 (helix-turn-helix DNA-binding domain protein) Indra_53 Indra_54 (ThyX-like thymidylate synthase) Indra_55 Indra_56 (HNH endonuclease) Indra_57 (ribonucleotide reductase) Indra_58 Indra_59 Indra_60 (DNA binding protein) Indra_61 (metallophosphoesterase) Indra_62 Indra_63 Indra_64 (DNA primase) Indra_65 (DNA primase) Indra_66 Indra_67 (endonuclease VII) Indra_68 Indra_69 Indra_70 Indra_71 Indra_72 Indra_73 Indra_74 (DnaB-like dsDNA helicase) Indra_75 Indra_76 Indra_77 Indra_78 Indra_79 (Cas4 exonuclease) Indra_80 Indra_81 (immunity repressor) Indra_82 Indra_83 Indra_84 Indra_85 Indra_86 Indra_87 Indra_88 Indra_89 (SprT-like protease) Indra_90 Indra_91 Indra_92 Indra_93 (DNA methylase) Indra_94 (DNA methylase) Indra_95 (ParB-like nuclease domain protein) Indra_96 Indra_97 Indra_98 Indra_99 Indra_100 Indra_101 Indra_102 Indra_103 Indra_104 Indra_105
Submitted Annotation in DNA Master Format	Download
Submitted Minimal DNA Master File	Download
Author List	Download
Annotation Cover Sheet	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	MW822143
Refseq Number	None yet
Archiving Info
Archiving status	Archived
SEA Lysate Titer	1.93X10^10
Pitt Freezer Box#	99
Pitt Freezer Box Grid#	A7
Available Files
GenBank File for Phamerator	Download

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