Detailed Information for Phage MarysWell |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Eduardo Rocha Jr |
Year Found | 2015 |
Location Found | Austin, TX USA |
Finding Institution | St. Edward's University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 30.162222 N, 97.808611 W Map |
Discovery Notes | Founded in Mary Moore Searight Metropolitan Park. Inside an abandoned well that has decomposed objects inside of it. The well is next to a dry river bank and surrounded by a couple dead trees. A few feet from the well is surrounded by live trees |
Naming Notes | Since it was found inside an abandoned well in Mary Moore Searight Metropolitan Park, the chosen name gives respect to both the park and well which forms the name MarysWell |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 6, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2194 |
Genome length (bp) | 51469 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGGAGGTAA |
GC Content | 60.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A5 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | The plaque forms a clear circle shape in the middle surrounded by a darker shaded circle. This forms the shape of a bulls-eye, which is due to the switch from the lysogenic cycle to the lytic cycle. |
Morphotype | Siphoviridae |
Number of Genes | 88 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN586016 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
25 |
Pitt Freezer Box Grid# |
B9 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |